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Cofit
Protein
Homologs
Fitness for 5 genes in
Caulobacter crescentus NA1000 Δfur
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Top 15 experiments (either direction), sorted by average fitness
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500 nt
CCNA_01037 and CCNA_01038 are separated by 106 nucleotides
CCNA_01038 and CCNA_01039 are separated by 228 nucleotides
CCNA_01039 and CCNA_01040 overlap by 4 nucleotides
CCNA_01040 and CCNA_01041 are separated by 0 nucleotides
CCNA_01037: CCNA_01037 - GntR-family transcriptional regulator, at 1,132,130 to 1,132,891
_01037
CCNA_01038: CCNA_01038 - glyoxalase family protein, at 1,132,998 to 1,133,387
_01038
CCNA_01039: CCNA_01039 - putative hexuronate transporter, major facilitator superfamily, at 1,133,616 to 1,134,932
_01039
CCNA_01040: CCNA_01040 - beta-xylosidase/alpha-L-arabinofuranosidase, at 1,134,929 to 1,136,569
_01040
CCNA_01041: CCNA_01041 - hypothetical protein, at 1,136,570 to 1,136,704
_01041
Group
Condition
CCNA
_01037
CCNA
_01038
CCNA
_01039
CCNA
_01040
CCNA
_01041
stress
PYE with CHIR-090 4 ug/mL
-0.1
-0.2
-0.3
-0.2
+0.0
stress
PYE with CHIR-090 10 ug/mL
-0.1
-0.1
-0.3
-0.2
+0.2
stress
PYE with Dimethyl Sulfoxide 0.4 %
-0.0
-0.2
-0.2
-0.3
+0.3
stress
PYE with Dimethyl Sulfoxide 0.4 %
-0.1
-0.2
-0.2
-0.2
+0.5
stress
PYE with CHIR-090 4 ug/mL
+0.1
-0.1
-0.3
-0.0
+0.1
stress
PYE with Dimethyl Sulfoxide 0.4 vol%
+0.2
-0.1
-0.3
-0.1
+0.2
no stress control
PYE no stress control
+0.1
-0.2
-0.3
-0.1
+0.4
no stress control
PYE no stress control
+0.1
-0.0
-0.3
-0.1
+0.4
stress
PYE with CHIR-090 10 ug/mL
+0.0
-0.0
-0.3
-0.2
+0.5
stress
PYE with CHIR-090 40 ug/mL
+0.3
+0.1
-0.3
-0.2
+0.2
stress
PYE with CHIR-090 40 ug/mL
+0.1
-0.1
-0.3
-0.2
+0.7
stress
PYE with CHIR-090 4 ug/mL
+0.1
-0.1
-0.2
-0.2
+0.6
no stress control
PYE no stress control
+0.1
+0.1
-0.2
-0.1
+0.2
stress
PYE with CHIR-090 40 ug/mL
+0.0
+0.0
-0.1
-0.1
+0.5
stress
PYE with CHIR-090 10 ug/mL
+0.2
+0.2
-0.3
-0.0
+0.6
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