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Cofit
Protein
Homologs
Fitness for 5 genes in
Caulobacter crescentus NA1000 Δfur
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Top 15 experiments (either direction), sorted by average fitness
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500 nt
CCNA_00659 and CCNA_00660 overlap by 4 nucleotides
CCNA_00660 and CCNA_00661 overlap by 4 nucleotides
CCNA_00661 and CCNA_00662 overlap by 17 nucleotides
CCNA_00662 and CCNA_00663 are separated by 43 nucleotides
CCNA_00659: CCNA_00659 - type I restriction-modification system restriction subunit, at 714,931 to 717,825
_00659
CCNA_00660: CCNA_00660 - transposase, at 717,822 to 718,802
_00660
CCNA_00661: CCNA_00661 - transposase, HTH-Tnp1 superfamily, at 718,799 to 719,233
_00661
CCNA_00662: CCNA_00662 - hypothetical protein, at 719,217 to 719,564
_00662
CCNA_00663: CCNA_00663 - bacterial apoptosis endonuclease BapE, at 719,608 to 719,943
_00663
Group
Condition
CCNA
_00659
CCNA
_00660
CCNA
_00661
CCNA
_00662
CCNA
_00663
stress
PYE with CHIR-090 40 ug/mL
-0.0
N.D.
N.D.
-0.0
-0.7
stress
PYE with Dimethyl Sulfoxide 0.4 %
-0.0
N.D.
N.D.
+0.0
-0.5
no stress control
PYE no stress control
+0.1
N.D.
N.D.
+0.1
-0.6
stress
PYE with CHIR-090 4 ug/mL
-0.0
N.D.
N.D.
+0.2
-0.5
stress
PYE with Dimethyl Sulfoxide 0.4 vol%
+0.0
N.D.
N.D.
-0.0
-0.4
stress
PYE with CHIR-090 4 ug/mL
-0.0
N.D.
N.D.
+0.2
-0.4
no stress control
PYE no stress control
+0.1
N.D.
N.D.
+0.0
-0.3
stress
PYE with CHIR-090 40 ug/mL
-0.0
N.D.
N.D.
+0.2
-0.4
stress
PYE with CHIR-090 10 ug/mL
-0.0
N.D.
N.D.
+0.1
-0.3
stress
PYE with CHIR-090 40 ug/mL
+0.0
N.D.
N.D.
+0.1
-0.3
stress
PYE with CHIR-090 4 ug/mL
+0.1
N.D.
N.D.
+0.1
-0.3
stress
PYE with CHIR-090 10 ug/mL
+0.1
N.D.
N.D.
+0.0
-0.2
stress
PYE with CHIR-090 10 ug/mL
-0.0
N.D.
N.D.
+0.4
-0.5
no stress control
PYE no stress control
+0.0
N.D.
N.D.
+0.2
-0.3
stress
PYE with Dimethyl Sulfoxide 0.4 %
+0.0
N.D.
N.D.
+0.2
-0.3
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