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Cofit
Protein
Homologs
Fitness for 5 genes in
Caulobacter crescentus NA1000 Δfur
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Top 15 experiments (either direction), sorted by average fitness
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500 nt
CCNA_00657 and CCNA_00658 overlap by 4 nucleotides
CCNA_00658 and CCNA_00659 are separated by 10 nucleotides
CCNA_00659 and CCNA_00660 overlap by 4 nucleotides
CCNA_00660 and CCNA_00661 overlap by 4 nucleotides
CCNA_00657: CCNA_00657 - type I restriction-modification system specificity subunit, at 712,528 to 713,880
_00657
CCNA_00658: CCNA_00658 - 5-methylcytosine-specific restriction enzyme MRR, at 713,877 to 714,920
_00658
CCNA_00659: CCNA_00659 - type I restriction-modification system restriction subunit, at 714,931 to 717,825
_00659
CCNA_00660: CCNA_00660 - transposase, at 717,822 to 718,802
_00660
CCNA_00661: CCNA_00661 - transposase, HTH-Tnp1 superfamily, at 718,799 to 719,233
_00661
Group
Condition
CCNA
_00657
CCNA
_00658
CCNA
_00659
CCNA
_00660
CCNA
_00661
stress
PYE with CHIR-090 40 ug/mL
-0.1
+0.1
-0.0
N.D.
N.D.
stress
PYE with CHIR-090 40 ug/mL
-0.0
+0.1
-0.0
N.D.
N.D.
stress
PYE with CHIR-090 10 ug/mL
-0.2
+0.3
-0.0
N.D.
N.D.
stress
PYE with Dimethyl Sulfoxide 0.4 %
+0.1
+0.0
+0.0
N.D.
N.D.
stress
PYE with CHIR-090 4 ug/mL
-0.1
+0.2
+0.1
N.D.
N.D.
no stress control
PYE no stress control
+0.0
+0.1
+0.1
N.D.
N.D.
no stress control
PYE no stress control
-0.0
+0.2
+0.0
N.D.
N.D.
stress
PYE with Dimethyl Sulfoxide 0.4 %
-0.0
+0.3
-0.0
N.D.
N.D.
stress
PYE with CHIR-090 10 ug/mL
-0.1
+0.3
-0.0
N.D.
N.D.
stress
PYE with CHIR-090 40 ug/mL
-0.1
+0.3
+0.0
N.D.
N.D.
no stress control
PYE no stress control
-0.0
+0.2
+0.1
N.D.
N.D.
stress
PYE with CHIR-090 4 ug/mL
+0.0
+0.2
-0.0
N.D.
N.D.
stress
PYE with Dimethyl Sulfoxide 0.4 vol%
+0.1
+0.1
+0.0
N.D.
N.D.
stress
PYE with CHIR-090 4 ug/mL
+0.1
+0.3
-0.0
N.D.
N.D.
stress
PYE with CHIR-090 10 ug/mL
+0.1
+0.2
+0.1
N.D.
N.D.
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