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Cofit
Protein
Homologs
Fitness for 5 genes in
Caulobacter crescentus NA1000 Δfur
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Top 15 experiments (either direction), sorted by average fitness
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500 nt
CCNA_00653 and CCNA_00654 overlap by 11 nucleotides
CCNA_00654 and CCNA_00655 are separated by 288 nucleotides
CCNA_00655 and CCNA_00656 are separated by 385 nucleotides
CCNA_00656 and CCNA_00657 overlap by 4 nucleotides
CCNA_00653: CCNA_00653 - assimilatory nitrate reductase catalytic subunit, at 704,586 to 707,264
_00653
CCNA_00654: CCNA_00654 - uroporphyrin-III C-methyltransferase, at 707,254 to 708,039
_00654
CCNA_00655: CCNA_00655 - hypothetical protein, at 708,328 to 710,310
_00655
CCNA_00656: CCNA_00656 - type I restriction-modification system methylation subunit, at 710,696 to 712,531
_00656
CCNA_00657: CCNA_00657 - type I restriction-modification system specificity subunit, at 712,528 to 713,880
_00657
Group
Condition
CCNA
_00653
CCNA
_00654
CCNA
_00655
CCNA
_00656
CCNA
_00657
stress
PYE with CHIR-090 10 ug/mL
-0.2
-0.3
-0.3
+0.0
-0.2
stress
PYE with CHIR-090 40 ug/mL
-0.2
-0.3
-0.2
+0.1
-0.0
no stress control
PYE no stress control
-0.2
-0.4
-0.2
+0.1
+0.0
stress
PYE with Dimethyl Sulfoxide 0.4 %
-0.2
-0.3
-0.2
-0.0
+0.1
stress
PYE with CHIR-090 40 ug/mL
-0.2
-0.1
-0.3
+0.1
-0.1
stress
PYE with CHIR-090 10 ug/mL
-0.2
-0.3
-0.2
+0.0
+0.1
stress
PYE with Dimethyl Sulfoxide 0.4 %
-0.2
-0.3
-0.1
+0.0
-0.0
stress
PYE with CHIR-090 4 ug/mL
-0.2
-0.2
-0.2
+0.1
-0.1
stress
PYE with CHIR-090 40 ug/mL
-0.1
-0.3
-0.1
+0.0
-0.1
no stress control
PYE no stress control
-0.2
-0.2
-0.2
+0.0
-0.0
stress
PYE with CHIR-090 10 ug/mL
-0.2
-0.1
-0.1
+0.0
-0.1
no stress control
PYE no stress control
-0.1
-0.3
-0.1
+0.1
-0.0
stress
PYE with Dimethyl Sulfoxide 0.4 vol%
-0.1
-0.2
-0.1
+0.1
+0.1
stress
PYE with CHIR-090 4 ug/mL
-0.1
-0.2
-0.1
+0.0
+0.1
stress
PYE with CHIR-090 4 ug/mL
-0.1
-0.1
+0.0
+0.1
+0.0
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