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Cofit
Protein
Homologs
Fitness for 5 genes in
Caulobacter crescentus NA1000 Δfur
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Top 15 experiments (either direction), sorted by average fitness
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500 nt
CCNA_00623 and CCNA_03925 overlap by 1252 nucleotides
CCNA_03925 and CCNA_00624 are separated by 1009 nucleotides
CCNA_00624 and CCNA_00625 are separated by 101 nucleotides
CCNA_00625 and CCNA_00626 are separated by 53 nucleotides
CCNA_00623: CCNA_00623 - PAS-family sensor histidine kinase, at 666,944 to 669,151
_00623
CCNA_03925: CCNA_03925 - hypothetical protein, at 667,900 to 668,223
_03925
CCNA_00624: CCNA_00624 - hypothetical protein with pentapeptide repeats, at 669,233 to 670,396
_00624
CCNA_00625: CCNA_00625 - two-component receiver domain protein, at 670,498 to 670,875
_00625
CCNA_00626: CCNA_00626 - methyl-accepting chemotaxis protein, at 670,929 to 672,842
_00626
Group
Condition
CCNA
_00623
CCNA
_03925
CCNA
_00624
CCNA
_00625
CCNA
_00626
stress
PYE with Dimethyl Sulfoxide 0.4 %
-0.0
N.D.
-0.2
+0.1
-0.2
stress
PYE with CHIR-090 10 ug/mL
-0.0
N.D.
-0.1
+0.1
-0.3
stress
PYE with CHIR-090 10 ug/mL
-0.1
N.D.
-0.2
+0.3
-0.3
stress
PYE with CHIR-090 40 ug/mL
+0.0
N.D.
-0.1
+0.1
-0.2
stress
PYE with CHIR-090 4 ug/mL
-0.1
N.D.
-0.0
+0.1
-0.2
stress
PYE with CHIR-090 40 ug/mL
-0.0
N.D.
-0.2
+0.3
-0.1
no stress control
PYE no stress control
-0.0
N.D.
-0.2
+0.3
-0.2
no stress control
PYE no stress control
-0.1
N.D.
-0.1
+0.2
-0.1
stress
PYE with CHIR-090 10 ug/mL
-0.1
N.D.
-0.1
+0.2
-0.1
no stress control
PYE no stress control
-0.0
N.D.
-0.1
+0.2
-0.1
stress
PYE with CHIR-090 4 ug/mL
-0.0
N.D.
-0.1
+0.3
-0.1
stress
PYE with CHIR-090 4 ug/mL
-0.1
N.D.
+0.1
+0.2
-0.1
stress
PYE with CHIR-090 40 ug/mL
-0.1
N.D.
-0.0
+0.3
-0.1
stress
PYE with Dimethyl Sulfoxide 0.4 %
+0.1
N.D.
-0.0
+0.2
-0.1
stress
PYE with Dimethyl Sulfoxide 0.4 vol%
+0.1
N.D.
+0.0
+0.4
-0.2
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