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Cofit
Protein
Homologs
Fitness for 5 genes in
Caulobacter crescentus NA1000 Δfur
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Top 15 experiments (either direction), sorted by average fitness
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500 nt
CCNA_00174 and CCNA_00175 are separated by 11 nucleotides
CCNA_00175 and CCNA_00176 overlap by 86 nucleotides
CCNA_00176 and CCNA_00177 overlap by 32 nucleotides
CCNA_00177 and CCNA_00178 overlap by 4 nucleotides
CCNA_00174: CCNA_00174 - type II secretion pathway protein F, at 189,809 to 191,020
_00174
CCNA_00175: CCNA_00175 - type II secretion pathway protein G, at 191,032 to 191,484
_00175
CCNA_00176: CCNA_00176 - type II secretion pathway protein H, at 191,399 to 191,956
_00176
CCNA_00177: CCNA_00177 - type II secretion pathway protein I, at 191,925 to 192,308
_00177
CCNA_00178: CCNA_00178 - type II secretion pathway protein J, at 192,305 to 192,895
_00178
Group
Condition
CCNA
_00174
CCNA
_00175
CCNA
_00176
CCNA
_00177
CCNA
_00178
stress
PYE with CHIR-090 40 ug/mL
-0.4
-0.4
-0.1
-0.4
-0.3
stress
PYE with CHIR-090 40 ug/mL
-0.3
-0.3
-0.2
-0.2
-0.3
stress
PYE with CHIR-090 4 ug/mL
-0.2
-0.3
-0.3
-0.2
-0.2
stress
PYE with Dimethyl Sulfoxide 0.4 %
-0.3
-0.4
-0.0
-0.1
-0.3
stress
PYE with Dimethyl Sulfoxide 0.4 vol%
-0.2
-0.3
-0.2
-0.1
-0.2
stress
PYE with CHIR-090 4 ug/mL
-0.3
-0.3
-0.0
-0.3
-0.0
stress
PYE with Dimethyl Sulfoxide 0.4 %
-0.2
-0.4
-0.1
-0.0
-0.2
stress
PYE with CHIR-090 10 ug/mL
-0.3
-0.2
-0.0
-0.3
-0.0
no stress control
PYE no stress control
-0.2
-0.5
-0.1
-0.0
-0.0
stress
PYE with CHIR-090 10 ug/mL
-0.2
-0.2
-0.2
-0.2
-0.0
no stress control
PYE no stress control
-0.2
-0.2
-0.2
-0.1
+0.0
no stress control
PYE no stress control
-0.1
-0.1
-0.1
-0.3
-0.0
stress
PYE with CHIR-090 4 ug/mL
-0.4
-0.1
+0.1
+0.1
-0.2
stress
PYE with CHIR-090 10 ug/mL
-0.1
-0.1
-0.1
+0.0
-0.2
stress
PYE with CHIR-090 40 ug/mL
-0.3
-0.0
-0.0
+0.2
-0.2
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