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Cofit
Protein
Homologs
Fitness for 5 genes in
Caulobacter crescentus NA1000 Δfur
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Top 15 experiments (either direction), sorted by average fitness
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500 nt
CCNA_03911 and CCNA_00021 are separated by 61 nucleotides
CCNA_00021 and CCNA_00022 overlap by 4 nucleotides
CCNA_00022 and CCNA_00023 are separated by 182 nucleotides
CCNA_00023 and CCNA_00024 are separated by 16 nucleotides
CCNA_03911: CCNA_03911 - hypothetical protein, at 20,665 to 20,778
_03911
CCNA_00021: CCNA_00021 - putative aerobic-type carbon monoxide dehydrogenase, large subunit CoxL, at 20,840 to 23,032
_00021
CCNA_00022: CCNA_00022 - putative aerobic-type carbon monoxide dehydrogenase, small subunit CoxS, at 23,029 to 23,559
_00022
CCNA_00023: CCNA_00023 - putative periplasmic protein, at 23,742 to 24,074
_00023
CCNA_00024: CCNA_00024 - uroporphyrin-III C-methyltransferase/Precorrin-2 dehydrogenase/Sirohydrochlorin ferrochelatase, at 24,091 to 24,981
_00024
Group
Condition
CCNA
_03911
CCNA
_00021
CCNA
_00022
CCNA
_00023
CCNA
_00024
stress
PYE with CHIR-090 40 ug/mL
+0.2
+0.0
-0.0
+0.0
-0.5
no stress control
PYE no stress control
-0.1
-0.0
-0.1
+0.2
-0.1
stress
PYE with Dimethyl Sulfoxide 0.4 %
+0.1
+0.1
+0.1
+0.0
-0.4
no stress control
PYE no stress control
-0.0
+0.0
+0.0
+0.2
-0.3
stress
PYE with CHIR-090 10 ug/mL
+0.1
+0.2
+0.1
+0.1
-0.6
stress
PYE with CHIR-090 4 ug/mL
+0.0
+0.0
-0.0
+0.2
-0.2
stress
PYE with CHIR-090 10 ug/mL
+0.1
-0.0
+0.0
+0.2
-0.2
stress
PYE with CHIR-090 4 ug/mL
+0.4
+0.1
+0.1
+0.3
-0.6
stress
PYE with CHIR-090 10 ug/mL
+0.2
+0.1
-0.1
+0.1
+0.2
stress
PYE with CHIR-090 40 ug/mL
+0.4
+0.1
+0.3
+0.3
-0.4
no stress control
PYE no stress control
+0.3
+0.0
+0.1
+0.1
+0.1
stress
PYE with CHIR-090 40 ug/mL
+0.2
+0.2
+0.1
+0.3
+0.1
stress
PYE with CHIR-090 4 ug/mL
+0.5
+0.1
-0.1
+0.2
+0.2
stress
PYE with Dimethyl Sulfoxide 0.4 vol%
+0.6
+0.1
+0.2
+0.1
+0.2
stress
PYE with Dimethyl Sulfoxide 0.4 %
+0.6
+0.2
+0.1
+0.2
+0.4
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