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Fitness for 5 genes in
Escherichia coli ECRC62
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500 nt
thiI and xseB are separated by 205 nucleotides
xseB and ispA overlap by 1 nucleotides
ispA and dxs are separated by 24 nucleotides
dxs and yajO are separated by 179 nucleotides
BNILDI_22770: thiI - tRNA sulfurtransferase, at 4,581,982 to 4,583,430
thiI
BNILDI_22775: xseB - exodeoxyribonuclease VII small subunit, at 4,583,636 to 4,583,878
xseB
BNILDI_22780: ispA - (2E,6E)-farnesyl diphosphate synthase, at 4,583,878 to 4,584,777
ispA
BNILDI_22785: dxs - 1-deoxy-D-xylulose-5-phosphate synthase, at 4,584,802 to 4,586,664
dxs
BNILDI_22790: yajO - 1-deoxyxylulose-5-phosphate synthase YajO, at 4,586,844 to 4,587,818
yajO
Group
Condition
BNILDI
_22770
BNILDI
_22775
BNILDI
_22780
BNILDI
_22785
BNILDI
_22790
thiI
xseB
ispA
dxs
yajO
phage
RB68
-1.9
N.D.
N.D.
N.D.
-0.4
phage
RB68
-2.1
N.D.
N.D.
N.D.
-0.0
carbon source
L-Arabinose
-1.2
N.D.
N.D.
N.D.
-0.3
carbon source
Sodium-DL-Lactate
-1.3
N.D.
N.D.
N.D.
-0.2
carbon source
Sodium-DL-Lactate
-1.0
N.D.
N.D.
N.D.
-0.2
carbon source
L-Arabinose
-1.0
N.D.
N.D.
N.D.
+0.2
phage
JK38
-0.4
N.D.
N.D.
N.D.
-0.3
carbon source
D-Glucose
-0.7
N.D.
N.D.
N.D.
+0.1
carbon source
Casamino-acids
-0.5
N.D.
N.D.
N.D.
-0.1
phage
JK36
-0.4
N.D.
N.D.
N.D.
-0.1
phage
MPec2
-0.3
N.D.
N.D.
N.D.
-0.2
phage
JK38
-0.5
N.D.
N.D.
N.D.
-0.0
carbon source
D-Glucose
-0.4
N.D.
N.D.
N.D.
+0.0
phage
JK36
-0.4
N.D.
N.D.
N.D.
+0.1
phage
MPec2
-0.2
N.D.
N.D.
N.D.
-0.1
phage
Bas68
-0.4
N.D.
N.D.
N.D.
+0.1
carbon source
Casamino-acids
-0.3
N.D.
N.D.
N.D.
+0.1
phage
Bas61
+0.2
N.D.
N.D.
N.D.
-0.1
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