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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC62
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
ubiF and miaB are separated by 145 nucleotides
miaB and ybeZ are separated by 113 nucleotides
ybeZ and ybeY overlap by 4 nucleotides
ybeY and corC are separated by 89 nucleotides
BNILDI_21605: ubiF - 3-demethoxyubiquinol 3-hydroxylase, at 4,342,813 to 4,343,988
ubiF
BNILDI_21610: miaB - tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB, at 4,344,134 to 4,345,558
miaB
BNILDI_21615: ybeZ - PhoH-like protein, at 4,345,672 to 4,346,751
ybeZ
BNILDI_21620: ybeY - rRNA maturation RNase YbeY, at 4,346,748 to 4,347,215
ybeY
BNILDI_21625: corC - CNNM family magnesium/cobalt transport protein CorC, at 4,347,305 to 4,348,183
corC
Group
Condition
BNILDI
_21605
BNILDI
_21610
BNILDI
_21615
BNILDI
_21620
BNILDI
_21625
ubiF
miaB
ybeZ
ybeY
corC
phage
RB68
N.D.
-1.9
-0.4
N.D.
-1.5
phage
RB68
N.D.
-1.1
-0.8
N.D.
-0.5
carbon source
L-Arabinose
N.D.
+0.1
-0.1
N.D.
-1.4
carbon source
D-Glucose
N.D.
+0.1
-0.2
N.D.
-1.3
phage
JK38
N.D.
-0.3
-0.1
N.D.
-0.8
phage
MPec2
N.D.
-0.2
-0.3
N.D.
-0.6
carbon source
D-Glucose
N.D.
+0.0
+0.0
N.D.
-1.1
carbon source
Sodium-DL-Lactate
N.D.
+0.0
-0.0
N.D.
-1.0
phage
MPec2
N.D.
-0.1
-0.1
N.D.
-0.8
carbon source
Sodium-DL-Lactate
N.D.
+0.2
-0.2
N.D.
-0.9
carbon source
Casamino-acids
N.D.
+0.1
+0.2
N.D.
-1.1
phage
Bas68
N.D.
-0.1
-0.3
N.D.
-0.4
phage
JK36
N.D.
-0.3
-0.1
N.D.
-0.3
carbon source
Casamino-acids
N.D.
+0.0
+0.2
N.D.
-0.9
phage
JK36
N.D.
-0.0
-0.5
N.D.
-0.1
carbon source
L-Arabinose
N.D.
+0.1
+0.0
N.D.
-0.6
phage
Bas61
N.D.
+0.2
-0.2
N.D.
-0.5
phage
JK38
N.D.
-0.3
-0.1
N.D.
+0.0
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