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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC62
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500 nt
rlmC and ybjO are separated by 40 nucleotides
ybjO and potH are separated by 59 nucleotides
potH and potH overlap by 4 nucleotides
potH and potG are separated by 9 nucleotides
BNILDI_20560: rlmC - 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC, at 4,142,119 to 4,143,246
rlmC
BNILDI_20565: ybjO - Inner membrane protein YbjO, at 4,143,287 to 4,143,775
ybjO
BNILDI_20570: potH - putrescine ABC transporter permease PotH, at 4,143,835 to 4,144,680
potH
BNILDI_20575: potH - putrescine ABC transporter permease PotH, at 4,144,677 to 4,145,630
potH
BNILDI_20580: potG - putrescine ABC transporter ATP-binding subunit PotG, at 4,145,640 to 4,146,773
potG
Group
Condition
BNILDI
_20560
BNILDI
_20565
BNILDI
_20570
BNILDI
_20575
BNILDI
_20580
rlmC
ybjO
potH
potH
potG
carbon source
D-Glucose
-0.1
-0.5
-0.3
-0.3
-0.2
carbon source
Sodium-DL-Lactate
-0.3
-0.3
-0.2
-0.1
-0.3
phage
Bas68
+0.1
-0.2
-0.2
-0.5
-0.1
carbon source
L-Arabinose
+0.2
-0.3
-0.2
-0.4
-0.1
phage
MPec2
-0.2
-0.0
-0.4
-0.2
-0.0
phage
JK36
-0.0
-0.3
-0.1
+0.2
-0.1
carbon source
Sodium-DL-Lactate
-0.0
-0.0
-0.1
-0.1
-0.1
carbon source
D-Glucose
+0.1
-0.2
-0.0
-0.1
-0.0
carbon source
L-Arabinose
+0.1
-0.1
-0.0
-0.1
-0.2
carbon source
Casamino-acids
+0.2
-0.2
+0.2
-0.4
-0.2
phage
JK38
+0.1
-0.2
-0.1
+0.0
-0.1
phage
RB68
+0.6
-0.3
-0.3
+0.1
-0.2
phage
JK38
+0.0
+0.2
+0.0
+0.0
-0.1
carbon source
Casamino-acids
+0.0
+0.3
+0.1
-0.2
+0.0
phage
JK36
-0.1
-0.1
+0.3
+0.2
+0.0
phage
MPec2
+0.2
+0.1
+0.1
+0.2
-0.3
phage
Bas61
+0.1
-0.0
+0.3
-0.0
+0.0
phage
RB68
+0.3
+0.3
+0.6
-0.2
-0.1
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