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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC62
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500 nt
cydC and aat are separated by 41 nucleotides
aat and infA are separated by 284 nucleotides
infA and Ser_trna are separated by 252 nucleotides
Ser_trna and clpA are separated by 343 nucleotides
BNILDI_20415: cydC - cysteine/glutathione ABC transporter ATP-binding protein/permease CydC, at 4,112,593 to 4,114,314
cydC
BNILDI_20420: aat - leucyl/phenylalanyl-tRNA--protein transferase, at 4,114,356 to 4,115,060
aat
BNILDI_20425: infA - translation initiation factor IF-1, at 4,115,345 to 4,115,563
infA
BNILDI_20430: Ser_trna - tRNA-Ser(gga), at 4,115,816 to 4,115,903
_trna
BNILDI_20435: clpA - ATP-dependent Clp protease ATP-binding subunit ClpA, at 4,116,247 to 4,118,523
clpA
Group
Condition
BNILDI
_20415
BNILDI
_20420
BNILDI
_20425
BNILDI
_20430
BNILDI
_20435
cydC
aat
infA
Ser_trna
clpA
carbon source
L-Arabinose
N.D.
-0.4
N.D.
N.D.
-0.7
carbon source
Sodium-DL-Lactate
N.D.
-0.0
N.D.
N.D.
-1.0
carbon source
L-Arabinose
N.D.
+0.2
N.D.
N.D.
-1.0
phage
RB68
N.D.
-0.4
N.D.
N.D.
-0.3
carbon source
Sodium-DL-Lactate
N.D.
-0.1
N.D.
N.D.
-0.4
carbon source
D-Glucose
N.D.
-0.1
N.D.
N.D.
-0.3
phage
JK38
N.D.
-0.4
N.D.
N.D.
+0.0
phage
MPec2
N.D.
-0.0
N.D.
N.D.
-0.3
phage
JK38
N.D.
+0.2
N.D.
N.D.
-0.4
carbon source
Casamino-acids
N.D.
-0.2
N.D.
N.D.
+0.1
phage
JK36
N.D.
-0.0
N.D.
N.D.
-0.0
phage
MPec2
N.D.
+0.0
N.D.
N.D.
+0.1
carbon source
D-Glucose
N.D.
+0.2
N.D.
N.D.
-0.1
phage
Bas61
N.D.
+0.2
N.D.
N.D.
-0.1
carbon source
Casamino-acids
N.D.
-0.0
N.D.
N.D.
+0.2
phage
Bas68
N.D.
+0.2
N.D.
N.D.
-0.0
phage
JK36
N.D.
-0.0
N.D.
N.D.
+0.2
phage
RB68
N.D.
+0.3
N.D.
N.D.
+0.4
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