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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC62
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500 nt
rpsA and cmk are separated by 110 nucleotides
cmk and ycaL are separated by 172 nucleotides
ycaL and aroA are separated by 168 nucleotides
aroA and serC are separated by 70 nucleotides
BNILDI_20285: rpsA - 30S ribosomal protein S1, at 4,078,005 to 4,079,678
rpsA
BNILDI_20290: cmk - (d)CMP kinase, at 4,079,789 to 4,080,472
cmk
BNILDI_20295: ycaL - metallopeptidase YcaL, at 4,080,645 to 4,081,409
ycaL
BNILDI_20300: aroA - 3-phosphoshikimate 1-carboxyvinyltransferase, at 4,081,578 to 4,082,861
aroA
BNILDI_20305: serC - 3-phosphoserine/phosphohydroxythreonine transaminase, at 4,082,932 to 4,084,020
serC
Group
Condition
BNILDI
_20285
BNILDI
_20290
BNILDI
_20295
BNILDI
_20300
BNILDI
_20305
rpsA
cmk
ycaL
aroA
serC
carbon source
L-Arabinose
N.D.
N.D.
+0.1
-5.0
-5.9
carbon source
D-Glucose
N.D.
N.D.
-0.0
-5.3
-5.1
carbon source
D-Glucose
N.D.
N.D.
-0.0
-5.6
-4.7
carbon source
Sodium-DL-Lactate
N.D.
N.D.
+0.2
-5.2
-5.3
carbon source
Sodium-DL-Lactate
N.D.
N.D.
+0.3
-4.6
-5.9
carbon source
L-Arabinose
N.D.
N.D.
+0.0
-4.7
-4.0
carbon source
Casamino-acids
N.D.
N.D.
+0.0
-1.7
-3.1
carbon source
Casamino-acids
N.D.
N.D.
+0.3
-1.5
-2.9
phage
Bas61
N.D.
N.D.
+0.1
-0.3
-0.4
phage
Bas68
N.D.
N.D.
-0.1
-0.1
+0.1
phage
MPec2
N.D.
N.D.
-0.1
-0.2
+0.2
phage
JK38
N.D.
N.D.
-0.1
+0.1
+0.1
phage
MPec2
N.D.
N.D.
+0.2
-0.3
+0.2
phage
JK38
N.D.
N.D.
+0.3
-0.0
+0.1
phage
JK36
N.D.
N.D.
-0.0
+0.1
+0.3
phage
JK36
N.D.
N.D.
+0.4
+0.2
-0.1
phage
RB68
N.D.
N.D.
+0.4
-0.6
+1.3
phage
RB68
N.D.
N.D.
+0.2
-0.6
+1.6
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