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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC62
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500 nt
hyaA and Ser_trna are separated by 426 nucleotides
Ser_trna and yccA are separated by 206 nucleotides
yccA and tusE are separated by 90 nucleotides
tusE and yccX overlap by 4 nucleotides
BNILDI_19880: hyaA - hydrogenase 1 small subunit, at 3,990,943 to 3,992,061
hyaA
BNILDI_19885: Ser_trna - tRNA-Ser(tga), at 3,992,488 to 3,992,575
_trna
BNILDI_19890: yccA - FtsH protease modulator YccA, at 3,992,782 to 3,993,441
yccA
BNILDI_19895: tusE - sulfurtransferase TusE, at 3,993,532 to 3,993,861
tusE
BNILDI_19900: yccX - acylphosphatase, at 3,993,858 to 3,994,136
yccX
Group
Condition
BNILDI
_19880
BNILDI
_19885
BNILDI
_19890
BNILDI
_19895
BNILDI
_19900
hyaA
Ser_trna
yccA
tusE
yccX
phage
RB68
+0.1
N.D.
-0.1
N.D.
-1.8
carbon source
Casamino-acids
-0.1
N.D.
-0.2
N.D.
-1.2
phage
JK38
-0.2
N.D.
+0.0
N.D.
-0.1
carbon source
Casamino-acids
-0.0
N.D.
-0.3
N.D.
+0.2
carbon source
L-Arabinose
+0.0
N.D.
-0.5
N.D.
+0.4
carbon source
L-Arabinose
+0.1
N.D.
+0.0
N.D.
-0.1
carbon source
D-Glucose
-0.1
N.D.
-0.2
N.D.
+0.3
phage
JK36
+0.0
N.D.
+0.1
N.D.
-0.0
phage
MPec2
+0.0
N.D.
+0.1
N.D.
+0.2
phage
Bas68
-0.2
N.D.
+0.1
N.D.
+0.5
carbon source
Sodium-DL-Lactate
+0.1
N.D.
-0.2
N.D.
+0.7
phage
RB68
+0.3
N.D.
+0.4
N.D.
+0.0
carbon source
Sodium-DL-Lactate
+0.0
N.D.
-0.1
N.D.
+1.0
phage
Bas61
+0.1
N.D.
-0.1
N.D.
+1.0
carbon source
D-Glucose
+0.0
N.D.
-0.0
N.D.
+0.9
phage
MPec2
+0.1
N.D.
-0.1
N.D.
+1.2
phage
JK36
+0.2
N.D.
+0.3
N.D.
+1.3
phage
JK38
+0.2
N.D.
+0.0
N.D.
+1.7
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