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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC62
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
flgK and flgJ are separated by 65 nucleotides
flgJ and flgI overlap by 1 nucleotides
flgI and flgH are separated by 11 nucleotides
flgH and flgG are separated by 52 nucleotides
BNILDI_19320: flgK - flagellar hook-associated protein FlgK, at 3,885,470 to 3,887,113
flgK
BNILDI_19325: flgJ - flagellar assembly peptidoglycan hydrolase FlgJ, at 3,887,179 to 3,888,120
flgJ
BNILDI_19330: flgI - flagellar basal body P-ring protein FlgI, at 3,888,120 to 3,889,217
flgI
BNILDI_19335: flgH - flagellar basal body L-ring protein FlgH, at 3,889,229 to 3,889,927
flgH
BNILDI_19340: flgG - flagellar basal-body rod protein FlgG, at 3,889,980 to 3,890,762
flgG
Group
Condition
BNILDI
_19320
BNILDI
_19325
BNILDI
_19330
BNILDI
_19335
BNILDI
_19340
flgK
flgJ
flgI
flgH
flgG
phage
RB68
-0.0
-0.2
-0.1
-0.9
+0.1
carbon source
Casamino-acids
+0.2
-0.1
-0.0
-0.5
+0.1
phage
JK36
+0.1
+0.3
-0.1
-0.6
-0.0
phage
RB68
+0.0
+0.2
-0.2
-0.0
-0.2
phage
JK36
+0.3
+0.1
-0.0
-0.9
+0.4
phage
MPec2
+0.0
+0.3
-0.2
-0.3
+0.0
carbon source
D-Glucose
+0.3
+0.1
+0.3
-0.8
+0.0
phage
JK38
+0.0
+0.0
-0.1
+0.1
-0.1
phage
MPec2
+0.1
-0.1
-0.2
+0.3
+0.0
carbon source
L-Arabinose
-0.1
+0.3
+0.1
+0.1
-0.0
carbon source
D-Glucose
+0.1
+0.1
+0.1
+0.3
-0.2
carbon source
Casamino-acids
+0.3
+0.5
+0.3
-0.4
+0.2
carbon source
L-Arabinose
+0.1
+0.3
+0.2
+0.2
+0.2
carbon source
Sodium-DL-Lactate
+0.1
+0.6
-0.0
+0.2
+0.2
phage
Bas68
+0.6
+0.2
-0.2
+0.3
+0.2
phage
JK38
+0.0
-0.0
+0.2
+0.9
+0.1
carbon source
Sodium-DL-Lactate
+0.3
+0.6
+0.3
-0.1
+0.3
phage
Bas61
+0.2
+1.4
+1.0
-0.2
+1.6
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