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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC62
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500 nt
cobB and nagK are separated by 15 nucleotides
nagK and lolE are separated by 28 nucleotides
lolE and lolD are separated by 5 nucleotides
lolD and lolC overlap by 8 nucleotides
BNILDI_19130: cobB - NAD-dependent protein deacylase, at 3,845,148 to 3,845,969
cobB
BNILDI_19135: nagK - N-acetylglucosamine kinase, at 3,845,985 to 3,846,896
nagK
BNILDI_19140: lolE - lipoprotein-releasing ABC transporter permease subunit LolE, at 3,846,925 to 3,848,163
lolE
BNILDI_19145: lolD - lipoprotein-releasing ABC transporter ATP-binding protein LolD, at 3,848,169 to 3,848,870
lolD
BNILDI_19150: lolC - lipoprotein-releasing ABC transporter permease subunit LolC, at 3,848,863 to 3,850,062
lolC
Group
Condition
BNILDI
_19130
BNILDI
_19135
BNILDI
_19140
BNILDI
_19145
BNILDI
_19150
cobB
nagK
lolE
lolD
lolC
phage
RB68
+0.4
-1.0
N.D.
N.D.
N.D.
phage
RB68
+0.0
-0.6
N.D.
N.D.
N.D.
phage
JK36
+0.0
-0.4
N.D.
N.D.
N.D.
carbon source
D-Glucose
-0.2
-0.1
N.D.
N.D.
N.D.
carbon source
Sodium-DL-Lactate
+0.0
-0.3
N.D.
N.D.
N.D.
phage
MPec2
-0.2
-0.1
N.D.
N.D.
N.D.
carbon source
L-Arabinose
+0.0
-0.2
N.D.
N.D.
N.D.
carbon source
D-Glucose
+0.0
-0.2
N.D.
N.D.
N.D.
phage
MPec2
-0.1
-0.1
N.D.
N.D.
N.D.
carbon source
Casamino-acids
-0.4
+0.2
N.D.
N.D.
N.D.
carbon source
Casamino-acids
+0.2
-0.3
N.D.
N.D.
N.D.
phage
JK38
+0.0
-0.1
N.D.
N.D.
N.D.
phage
JK36
-0.1
+0.1
N.D.
N.D.
N.D.
carbon source
Sodium-DL-Lactate
+0.1
-0.1
N.D.
N.D.
N.D.
phage
Bas61
-0.0
+0.1
N.D.
N.D.
N.D.
phage
Bas68
+0.4
-0.1
N.D.
N.D.
N.D.
carbon source
L-Arabinose
+0.2
+0.3
N.D.
N.D.
N.D.
phage
JK38
+0.3
+0.3
N.D.
N.D.
N.D.
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