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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC62
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
ddpA and ddpB are separated by 1 nucleotides
ddpB and ddpC overlap by 4 nucleotides
ddpC and ddpD overlap by 4 nucleotides
ddpD and ddpF overlap by 8 nucleotides
BNILDI_17445: ddpA - putative D,D-dipeptide-binding periplasmic protein DdpA, at 3,509,740 to 3,511,290
ddpA
BNILDI_17450: ddpB - putative D,D-dipeptide transport system permease protein DdpB, at 3,511,292 to 3,512,314
ddpB
BNILDI_17455: ddpC - D,D-dipeptide ABC transporter permease, at 3,512,311 to 3,513,207
ddpC
BNILDI_17460: ddpD - putative D,D-dipeptide transport ATP-binding protein DdpD, at 3,513,204 to 3,514,190
ddpD
BNILDI_17465: ddpF - putative D,D-dipeptide transport ATP-binding protein DdpF, at 3,514,183 to 3,515,109
ddpF
Group
Condition
BNILDI
_17445
BNILDI
_17450
BNILDI
_17455
BNILDI
_17460
BNILDI
_17465
ddpA
ddpB
ddpC
ddpD
ddpF
carbon source
L-Arabinose
-0.3
+0.1
-0.1
-0.3
-0.3
carbon source
Casamino-acids
-0.3
+0.0
-0.1
-0.2
-0.4
carbon source
Casamino-acids
-0.5
-0.0
-0.1
+0.1
-0.3
phage
RB68
+0.0
+0.1
-0.1
-0.4
-0.4
phage
JK36
-0.2
-0.1
+0.0
-0.0
-0.3
carbon source
D-Glucose
-0.1
-0.2
+0.0
-0.2
-0.1
phage
JK38
-0.2
+0.0
-0.1
+0.2
-0.4
carbon source
Sodium-DL-Lactate
-0.2
-0.1
-0.1
-0.0
+0.0
phage
JK36
-0.2
-0.3
-0.0
+0.2
-0.2
carbon source
Sodium-DL-Lactate
+0.0
-0.0
-0.2
-0.1
-0.2
carbon source
L-Arabinose
-0.1
+0.1
-0.1
-0.1
-0.1
phage
MPec2
-0.1
+0.1
-0.1
+0.1
-0.2
phage
RB68
-0.2
+0.5
-0.5
-0.1
+0.1
carbon source
D-Glucose
-0.1
+0.2
-0.1
+0.1
-0.3
phage
Bas61
-0.2
+0.1
-0.1
+0.2
-0.2
phage
Bas68
-0.2
+0.2
-0.0
+0.2
-0.1
phage
JK38
-0.0
+0.0
+0.0
+0.1
-0.0
phage
MPec2
+0.2
+0.3
-0.0
+0.2
-0.1
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