Private Fitness
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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC62
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500 nt
ydhT and ydhS are separated by 11 nucleotides
ydhS and ydhR are separated by 125 nucleotides
ydhR and Val_trna are separated by 107 nucleotides
Val_trna and Val_trna are separated by 4 nucleotides
BNILDI_16635: ydhT - protein YdhT, at 3,332,019 to 3,332,783
ydhT
BNILDI_16640: ydhS - FAD-NAD(P)-binding protein, at 3,332,795 to 3,334,399
ydhS
BNILDI_16645: ydhR - monooxygenase, at 3,334,525 to 3,334,830
ydhR
BNILDI_16655: Val_trna - tRNA-Val(gac), at 3,334,938 to 3,335,014
_trna
BNILDI_16660: Val_trna - tRNA-Val(gac), at 3,335,019 to 3,335,095
_trna
Group
Condition
BNILDI
_16635
BNILDI
_16640
BNILDI
_16645
BNILDI
_16655
BNILDI
_16660
ydhT
ydhS
ydhR
Val_trna
Val_trna
carbon source
L-Arabinose
-0.3
-0.1
-0.5
N.D.
N.D.
carbon source
Casamino-acids
-0.1
-0.1
-0.5
N.D.
N.D.
phage
RB68
+0.1
-0.2
-0.5
N.D.
N.D.
phage
JK38
-0.0
-0.1
-0.4
N.D.
N.D.
phage
MPec2
+0.1
-0.0
-0.4
N.D.
N.D.
phage
JK38
+0.1
-0.3
+0.1
N.D.
N.D.
carbon source
Casamino-acids
-0.2
-0.1
+0.2
N.D.
N.D.
phage
JK36
+0.2
+0.1
-0.5
N.D.
N.D.
phage
Bas61
+0.3
-0.2
-0.2
N.D.
N.D.
carbon source
Sodium-DL-Lactate
-0.3
+0.0
+0.2
N.D.
N.D.
carbon source
D-Glucose
+0.0
+0.2
-0.3
N.D.
N.D.
carbon source
Sodium-DL-Lactate
+0.1
+0.1
-0.2
N.D.
N.D.
phage
MPec2
-0.2
-0.0
+0.3
N.D.
N.D.
phage
JK36
+0.0
+0.1
-0.0
N.D.
N.D.
carbon source
L-Arabinose
+0.1
-0.1
+0.2
N.D.
N.D.
carbon source
D-Glucose
-0.1
+0.0
+0.3
N.D.
N.D.
phage
Bas68
+0.0
+0.1
+0.1
N.D.
N.D.
phage
RB68
+0.4
-0.1
+0.3
N.D.
N.D.
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