Private Fitness
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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC62
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500 nt
sufC and sufD overlap by 26 nucleotides
sufD and sufS overlap by 4 nucleotides
sufS and sufE are separated by 12 nucleotides
sufE and ldtE are separated by 148 nucleotides
BNILDI_16570: sufC - Fe-S cluster assembly ATPase SufC, at 3,319,017 to 3,319,763
sufC
BNILDI_16575: sufD - Fe-S cluster assembly protein SufD, at 3,319,738 to 3,321,009
sufD
BNILDI_16580: sufS - cysteine desulfurase SufS, at 3,321,006 to 3,322,226
sufS
BNILDI_16585: sufE - cysteine desulfuration protein SufE, at 3,322,239 to 3,322,655
sufE
BNILDI_16590: ldtE - L,D-transpeptidase LdtE, at 3,322,804 to 3,323,808
ldtE
Group
Condition
BNILDI
_16570
BNILDI
_16575
BNILDI
_16580
BNILDI
_16585
BNILDI
_16590
sufC
sufD
sufS
sufE
ldtE
phage
RB68
-0.1
-1.1
+0.5
-1.4
-0.2
phage
RB68
-0.4
-0.5
+0.2
-0.0
-0.1
carbon source
Casamino-acids
+0.1
-0.6
+0.0
+0.0
-0.1
phage
MPec2
+0.2
-0.7
-0.2
+0.3
-0.2
phage
JK36
+0.3
-0.6
-0.5
+0.5
-0.2
phage
JK36
-0.1
-0.2
-0.0
-0.2
+0.2
carbon source
Casamino-acids
-0.1
-0.3
-0.2
+0.5
-0.2
phage
Bas68
+0.0
+0.3
-0.2
-0.3
+0.1
phage
Bas61
+0.0
-0.0
-0.0
+0.2
-0.1
phage
JK38
+0.2
-0.6
+0.1
+0.1
+0.2
phage
JK38
+0.3
-0.0
-0.1
+0.2
-0.2
phage
MPec2
-0.2
-0.1
-0.1
+0.5
+0.0
carbon source
L-Arabinose
+0.2
-0.0
+0.0
+0.1
+0.0
carbon source
L-Arabinose
+0.0
-0.1
+0.1
+0.3
-0.1
carbon source
D-Glucose
+0.2
+0.1
+0.4
+0.2
-0.3
carbon source
Sodium-DL-Lactate
+0.1
+0.1
+0.3
+0.3
+0.0
carbon source
Sodium-DL-Lactate
+0.3
+0.1
+0.3
+0.3
-0.1
carbon source
D-Glucose
+0.2
-0.1
+0.4
+0.5
+0.0
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