Private Fitness
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Protein
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Fitness for 5 genes in
Escherichia coli ECRC62
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500 nt
apbE and ada are separated by 73 nucleotides
ada and alkB overlap by 1 nucleotides
alkB and yojI are separated by 75 nucleotides
yojI and mqo are separated by 217 nucleotides
BNILDI_13700: apbE - FAD:protein FMN transferase ApbE, at 2,757,748 to 2,758,803
apbE
BNILDI_13705: ada - bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada, at 2,758,877 to 2,759,941
ada
BNILDI_13710: alkB - DNA oxidative demethylase AlkB, at 2,759,941 to 2,760,591
alkB
BNILDI_13715: yojI - microcin J25 efflux ABC transporter YojI, at 2,760,667 to 2,762,310
yojI
BNILDI_13720: mqo - malate dehydrogenase (quinone), at 2,762,528 to 2,764,174
mqo
Group
Condition
BNILDI
_13700
BNILDI
_13705
BNILDI
_13710
BNILDI
_13715
BNILDI
_13720
apbE
ada
alkB
yojI
mqo
phage
RB68
-2.0
+0.4
+0.4
-0.4
+0.0
phage
RB68
-1.1
+0.4
+0.6
-0.0
-0.5
carbon source
L-Arabinose
-0.3
-0.2
+0.0
-0.1
+0.0
phage
JK38
-0.3
-0.4
-0.2
+0.4
-0.0
phage
JK38
-0.5
-0.1
+0.2
-0.1
+0.3
phage
Bas68
-0.0
-0.0
-0.1
-0.1
+0.1
phage
MPec2
-0.3
-0.1
-0.1
+0.3
+0.2
carbon source
Casamino-acids
+0.5
+0.3
-0.4
-0.1
-0.2
phage
Bas61
-0.6
+0.1
-0.0
+0.1
+0.4
carbon source
Casamino-acids
-0.3
+0.3
+0.1
+0.1
+0.1
carbon source
Sodium-DL-Lactate
-0.4
+0.3
+0.1
-0.1
+0.3
phage
MPec2
-0.3
+0.1
+0.2
+0.1
+0.2
carbon source
D-Glucose
-0.1
+0.4
-0.0
+0.0
-0.1
phage
JK36
+0.1
-0.1
+0.1
+0.2
+0.1
carbon source
Sodium-DL-Lactate
-0.1
+0.2
+0.1
+0.2
+0.0
phage
JK36
-0.4
+0.1
-0.1
+0.5
+0.3
carbon source
L-Arabinose
+0.0
-0.1
+0.4
+0.3
+0.2
carbon source
D-Glucose
+0.2
+0.2
+0.2
+0.2
+0.1
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