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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC62
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500 nt
rseB and rseC overlap by 4 nucleotides
rseC and lepA are separated by 197 nucleotides
lepA and lepB are separated by 15 nucleotides
lepB and rnc are separated by 271 nucleotides
BNILDI_11860: rseB - sigma-E factor regulatory protein RseB, at 2,376,944 to 2,377,900
rseB
BNILDI_11870: rseC - SoxR-reducing system protein RseC, at 2,377,897 to 2,378,376
rseC
BNILDI_11875: lepA - translation elongation factor 4, at 2,378,574 to 2,380,373
lepA
BNILDI_11880: lepB - signal peptidase I, at 2,380,389 to 2,381,363
lepB
BNILDI_11885: rnc - ribonuclease III, at 2,381,635 to 2,382,315
rnc
Group
Condition
BNILDI
_11860
BNILDI
_11870
BNILDI
_11875
BNILDI
_11880
BNILDI
_11885
rseB
rseC
lepA
lepB
rnc
phage
RB68
-2.2
-0.6
-0.6
N.D.
N.D.
phage
RB68
-1.2
-1.3
-0.2
N.D.
N.D.
phage
JK38
-1.0
-0.5
-0.8
N.D.
N.D.
phage
JK36
-0.7
-0.3
-0.4
N.D.
N.D.
phage
MPec2
-0.1
-0.5
-0.9
N.D.
N.D.
phage
MPec2
-0.1
-0.4
-0.7
N.D.
N.D.
phage
Bas61
-0.0
-0.1
-1.0
N.D.
N.D.
phage
JK38
-0.5
-0.2
-0.3
N.D.
N.D.
carbon source
Casamino-acids
-0.3
-0.5
-0.1
N.D.
N.D.
carbon source
Sodium-DL-Lactate
-0.0
-0.3
-0.6
N.D.
N.D.
carbon source
L-Arabinose
-0.1
+0.0
-0.6
N.D.
N.D.
carbon source
Sodium-DL-Lactate
+0.1
-0.3
-0.4
N.D.
N.D.
carbon source
Casamino-acids
-0.2
-0.2
-0.2
N.D.
N.D.
phage
Bas68
-0.1
-0.1
-0.3
N.D.
N.D.
carbon source
D-Glucose
-0.3
-0.2
+0.0
N.D.
N.D.
carbon source
D-Glucose
-0.3
-0.1
-0.0
N.D.
N.D.
carbon source
L-Arabinose
-0.0
-0.2
-0.1
N.D.
N.D.
phage
JK36
-0.2
-0.1
+0.4
N.D.
N.D.
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