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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC62
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500 nt
rpsP and rimM are separated by 18 nucleotides
rimM and trmD are separated by 30 nucleotides
trmD and rplS are separated by 41 nucleotides
rplS and yfiB are separated by 76 nucleotides
BNILDI_11655: rpsP - 30S ribosomal protein S16, at 2,339,689 to 2,339,937
rpsP
BNILDI_11660: rimM - ribosome maturation factor RimM, at 2,339,956 to 2,340,504
rimM
BNILDI_11665: trmD - tRNA (guanosine(37)-N1)-methyltransferase TrmD, at 2,340,535 to 2,341,302
trmD
BNILDI_11670: rplS - 50S ribosomal protein L19, at 2,341,344 to 2,341,691
rplS
BNILDI_11675: yfiB - OmpA family protein, at 2,341,768 to 2,342,250
yfiB
Group
Condition
BNILDI
_11655
BNILDI
_11660
BNILDI
_11665
BNILDI
_11670
BNILDI
_11675
rpsP
rimM
trmD
rplS
yfiB
phage
JK36
N.D.
N.D.
N.D.
N.D.
-0.4
phage
Bas68
N.D.
N.D.
N.D.
N.D.
-0.3
carbon source
L-Arabinose
N.D.
N.D.
N.D.
N.D.
-0.3
carbon source
Casamino-acids
N.D.
N.D.
N.D.
N.D.
-0.2
phage
JK36
N.D.
N.D.
N.D.
N.D.
-0.1
phage
MPec2
N.D.
N.D.
N.D.
N.D.
-0.0
phage
Bas61
N.D.
N.D.
N.D.
N.D.
+0.0
carbon source
Sodium-DL-Lactate
N.D.
N.D.
N.D.
N.D.
+0.0
carbon source
D-Glucose
N.D.
N.D.
N.D.
N.D.
+0.1
phage
MPec2
N.D.
N.D.
N.D.
N.D.
+0.1
carbon source
Sodium-DL-Lactate
N.D.
N.D.
N.D.
N.D.
+0.2
phage
JK38
N.D.
N.D.
N.D.
N.D.
+0.2
phage
RB68
N.D.
N.D.
N.D.
N.D.
+0.2
phage
JK38
N.D.
N.D.
N.D.
N.D.
+0.2
phage
RB68
N.D.
N.D.
N.D.
N.D.
+0.2
carbon source
D-Glucose
N.D.
N.D.
N.D.
N.D.
+0.3
carbon source
Casamino-acids
N.D.
N.D.
N.D.
N.D.
+0.4
carbon source
L-Arabinose
N.D.
N.D.
N.D.
N.D.
+0.5
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