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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC62
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500 nt
norV and norR are separated by 186 nucleotides
norR and gutQ overlap by 4 nucleotides
gutQ and srlR overlap by 8 nucleotides
srlR and gutM are separated by 66 nucleotides
BNILDI_11050: norV - anaerobic nitric oxide reductase flavorubredoxin, at 2,233,477 to 2,234,916
norV
BNILDI_11055: norR - nitric oxide reductase transcriptional regulator NorR, at 2,235,103 to 2,236,617
norR
BNILDI_11060: gutQ - arabinose-5-phosphate isomerase GutQ, at 2,236,614 to 2,237,579
gutQ
BNILDI_11065: srlR - glucitol operon DNA-binding transcriptional repressor SrlR, at 2,237,572 to 2,238,345
srlR
BNILDI_11070: gutM - transcriptional regulator GutM, at 2,238,412 to 2,238,771
gutM
Group
Condition
BNILDI
_11050
BNILDI
_11055
BNILDI
_11060
BNILDI
_11065
BNILDI
_11070
norV
norR
gutQ
srlR
gutM
phage
JK36
-0.2
-0.2
-0.1
-0.4
-0.1
phage
JK38
-0.0
+0.2
-0.1
-0.7
-0.3
carbon source
Casamino-acids
-0.0
-0.5
-0.2
-0.0
-0.1
phage
MPec2
+0.1
-0.4
-0.1
-0.5
+0.0
phage
JK38
+0.1
-0.0
-0.1
-0.7
+0.2
carbon source
Sodium-DL-Lactate
+0.0
-0.3
+0.0
+0.0
-0.2
phage
Bas61
-0.1
+0.1
+0.1
-0.6
+0.1
carbon source
Casamino-acids
+0.3
-0.2
+0.0
-0.7
+0.1
phage
JK36
+0.1
-0.1
+0.0
-0.7
+0.3
carbon source
Sodium-DL-Lactate
-0.1
+0.1
-0.2
-0.2
+0.2
phage
MPec2
+0.3
+0.0
-0.1
-0.4
-0.1
carbon source
L-Arabinose
+0.2
+0.1
+0.1
-0.0
-0.3
carbon source
D-Glucose
-0.0
-0.1
-0.1
+0.1
+0.1
phage
Bas68
+0.2
-0.2
+0.1
-0.2
+0.2
carbon source
L-Arabinose
+0.3
-0.3
+0.0
+0.0
+0.1
phage
RB68
+0.3
-0.3
+0.8
-0.2
-0.2
carbon source
D-Glucose
+0.2
-0.1
+0.1
+0.1
+0.4
phage
RB68
+0.2
-0.0
+0.6
+0.8
+0.2
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