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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC62
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500 nt
fixX and fixX overlap by 4 nucleotides
fixX and yaaU are separated by 57 nucleotides
yaaU and kefF are separated by 107 nucleotides
kefF and kefC overlap by 8 nucleotides
BNILDI_08385: fixX - ferredoxin-like protein FixX, at 1,674,863 to 1,676,149
fixX
BNILDI_08390: fixX - ferredoxin-like protein FixX, at 1,676,146 to 1,676,433
fixX
BNILDI_08395: yaaU - Putative metabolite transport protein YaaU, at 1,676,491 to 1,677,822
yaaU
BNILDI_08400: kefF - glutathione-regulated potassium-efflux system oxidoreductase KefF, at 1,677,930 to 1,678,460
kefF
BNILDI_08405: kefC - glutathione-regulated potassium-efflux system protein KefC, at 1,678,453 to 1,680,315
kefC
Group
Condition
BNILDI
_08385
BNILDI
_08390
BNILDI
_08395
BNILDI
_08400
BNILDI
_08405
fixX
fixX
yaaU
kefF
kefC
phage
RB68
-0.6
N.D.
-0.5
N.D.
+0.1
phage
JK36
-0.2
N.D.
-0.3
N.D.
-0.2
phage
Bas68
-0.2
N.D.
-0.1
N.D.
-0.1
phage
Bas61
-0.0
N.D.
-0.0
N.D.
-0.3
phage
JK38
-0.2
N.D.
+0.1
N.D.
-0.2
carbon source
Casamino-acids
+0.0
N.D.
-0.0
N.D.
-0.2
carbon source
L-Arabinose
+0.0
N.D.
-0.0
N.D.
-0.2
phage
MPec2
+0.1
N.D.
-0.1
N.D.
-0.1
carbon source
D-Glucose
+0.1
N.D.
-0.0
N.D.
-0.2
phage
RB68
+0.2
N.D.
-0.2
N.D.
-0.0
phage
JK36
-0.2
N.D.
+0.3
N.D.
-0.1
phage
JK38
+0.1
N.D.
+0.0
N.D.
-0.1
carbon source
Casamino-acids
-0.0
N.D.
+0.0
N.D.
+0.1
carbon source
D-Glucose
-0.2
N.D.
+0.1
N.D.
+0.2
carbon source
Sodium-DL-Lactate
+0.2
N.D.
+0.1
N.D.
-0.1
phage
MPec2
-0.0
N.D.
+0.2
N.D.
+0.1
carbon source
Sodium-DL-Lactate
-0.1
N.D.
-0.1
N.D.
+0.5
carbon source
L-Arabinose
+0.2
N.D.
-0.0
N.D.
+0.2
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