Fitness for 5 genes in Escherichia coli ECRC62

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500 nthpaD and hpaE are separated by 1 nucleotideshpaE and hpaG overlap by 4 nucleotideshpaG and hpaR are separated by 271 nucleotideshpaR and tsr are separated by 118 nucleotides BNILDI_07875: hpaD - 3,4-dihydroxyphenylacetate 2,3-dioxygenase, at 1,574,386 to 1,575,237 hpaD BNILDI_07880: hpaE - 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase, at 1,575,239 to 1,576,705 hpaE BNILDI_07885: hpaG - 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, at 1,576,702 to 1,577,991 hpaG BNILDI_07890: hpaR - homoprotocatechuate degradation operon regulator HpaR, at 1,578,263 to 1,578,709 hpaR BNILDI_07895: tsr - methyl-accepting chemotaxis protein, at 1,578,828 to 1,580,492 tsr
Group Condition BNILDI_07875 BNILDI_07880 BNILDI_07885 BNILDI_07890 BNILDI_07895
hpaD hpaE hpaG hpaR tsr
phage RB68 +0.2 -0.2 -0.4 -0.5 -0.6
phage JK38 -0.1 -0.2 -0.1 -0.4 -0.2
carbon source D-Glucose -0.0 -0.5 -0.0 -0.1 -0.3
carbon source Sodium-DL-Lactate -0.1 -0.2 -0.1 -0.4 -0.1
carbon source Sodium-DL-Lactate -0.0 -0.1 -0.2 -0.3 -0.0
carbon source Casamino-acids -0.1 -0.0 -0.2 +0.2 -0.2
phage RB68 +0.1 -0.2 +0.1 -0.2 -0.2
phage JK36 -0.0 +0.1 -0.1 -0.4 +0.1
carbon source Casamino-acids +0.1 -0.2 -0.1 +0.1 -0.1
phage MPec2 +0.0 -0.3 +0.1 -0.1 -0.0
phage MPec2 +0.1 +0.0 -0.1 -0.3 +0.1
phage Bas61 -0.0 +0.0 -0.1 -0.1 +0.0
carbon source D-Glucose +0.0 +0.3 -0.3 -0.2 +0.0
phage JK36 +0.0 -0.1 -0.1 -0.0 +0.2
carbon source L-Arabinose -0.1 -0.4 +0.1 +0.3 +0.1
carbon source L-Arabinose +0.0 +0.1 -0.0 -0.2 +0.2
phage JK38 -0.1 +0.2 +0.0 -0.3 +0.3
phage Bas68 +0.2 +0.2 +0.2 -0.1 -0.2
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