Private Fitness
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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC62
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500 nt
yjfM and yjfC are separated by 2 nucleotides
yjfC and aidB are separated by 83 nucleotides
aidB and yjfN are separated by 116 nucleotides
yjfN and bsmA are separated by 148 nucleotides
BNILDI_07035: yjfM - Uncharacterized protein YjfM, at 1,407,130 to 1,407,768
yjfM
BNILDI_07040: yjfC - Putative acid--amine ligase YjfC, at 1,407,771 to 1,408,934
yjfC
BNILDI_07045: aidB - isovaleryl-CoA dehydrogenase, at 1,409,018 to 1,410,643
aidB
BNILDI_07050: yjfN - protease activator YjfN, at 1,410,760 to 1,411,035
yjfN
BNILDI_07055: bsmA - biofilm peroxide resistance protein BsmA, at 1,411,184 to 1,411,513
bsmA
Group
Condition
BNILDI
_07035
BNILDI
_07040
BNILDI
_07045
BNILDI
_07050
BNILDI
_07055
yjfM
yjfC
aidB
yjfN
bsmA
carbon source
L-Arabinose
-0.3
+0.0
-0.2
-0.3
-0.1
phage
JK38
-0.1
-0.2
-0.1
+0.0
-0.3
phage
JK36
-0.0
-0.3
-0.0
-0.0
-0.2
phage
MPec2
-0.1
-0.2
-0.2
+0.1
-0.2
phage
Bas68
+0.1
-0.2
+0.0
-0.0
-0.4
carbon source
Sodium-DL-Lactate
-0.3
+0.3
+0.0
-0.3
-0.1
carbon source
Casamino-acids
-0.4
+0.0
-0.0
-0.3
+0.2
carbon source
L-Arabinose
-0.4
+0.1
+0.2
-0.1
-0.2
carbon source
Casamino-acids
-0.3
+0.1
+0.1
-0.3
-0.0
carbon source
D-Glucose
-0.1
-0.0
+0.1
-0.2
+0.1
carbon source
Sodium-DL-Lactate
-0.0
+0.0
+0.1
-0.2
-0.0
carbon source
D-Glucose
+0.0
-0.1
-0.1
-0.1
+0.1
phage
RB68
-0.5
-0.0
+0.3
+0.2
+0.0
phage
Bas61
+0.1
-0.1
-0.2
+0.2
+0.1
phage
JK36
-0.1
-0.0
+0.2
+0.1
-0.1
phage
JK38
+0.5
-0.3
-0.0
-0.1
+0.2
phage
MPec2
+0.4
-0.1
+0.0
+0.0
+0.0
phage
RB68
+0.2
+0.2
+0.4
-0.1
-0.1
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