Private Fitness
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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC62
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500 nt
ghoS and ghoT are separated by 27 nucleotides
ghoT and lysS are separated by 118 nucleotides
lysS and dtpC are separated by 236 nucleotides
dtpC and cadA are separated by 58 nucleotides
BNILDI_06730: ghoS - type V toxin-antitoxin system endoribonuclease antitoxin GhoS, at 1,346,607 to 1,346,903
ghoS
BNILDI_06735: ghoT - type V toxin-antitoxin system toxin GhoT, at 1,346,931 to 1,347,104
ghoT
BNILDI_06740: lysS - lysine--tRNA ligase, at 1,347,223 to 1,348,740
lysS
BNILDI_06745: dtpC - dipeptide/tripeptide permease DtpC, at 1,348,977 to 1,350,434
dtpC
BNILDI_06750: cadA - lysine decarboxylase CadA, at 1,350,493 to 1,352,640
cadA
Group
Condition
BNILDI
_06730
BNILDI
_06735
BNILDI
_06740
BNILDI
_06745
BNILDI
_06750
ghoS
ghoT
lysS
dtpC
cadA
carbon source
D-Glucose
-0.3
-0.7
-0.0
-0.1
-0.1
carbon source
L-Arabinose
-0.1
-0.6
-0.1
+0.0
+0.1
carbon source
Casamino-acids
-0.1
-0.4
-0.1
+0.0
+0.1
carbon source
D-Glucose
-0.2
-0.2
+0.0
-0.1
-0.1
phage
Bas61
-0.1
-0.2
+0.0
-0.1
-0.1
carbon source
Casamino-acids
+0.2
-0.5
-0.0
-0.0
-0.0
carbon source
Sodium-DL-Lactate
+0.0
-0.1
-0.1
+0.0
-0.0
phage
JK38
-0.0
-0.2
-0.0
+0.0
-0.0
carbon source
Sodium-DL-Lactate
+0.1
+0.1
-0.2
-0.2
+0.0
phage
MPec2
+0.0
-0.2
+0.3
-0.2
-0.1
carbon source
L-Arabinose
+0.1
-0.1
-0.0
-0.0
-0.1
phage
RB68
+0.5
+0.5
-0.2
-0.4
-0.2
phage
JK36
+0.5
-0.2
+0.0
+0.1
-0.2
phage
MPec2
+0.5
-0.4
+0.1
-0.0
+0.1
phage
JK38
+0.2
+0.1
-0.0
+0.2
-0.0
phage
Bas68
+0.3
+0.2
+0.0
+0.1
+0.0
phage
JK36
+0.5
+0.3
-0.0
-0.2
-0.0
phage
RB68
+0.7
+0.9
-0.2
+0.1
-0.1
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