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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC62
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500 nt
rng and yhdE overlap by 11 nucleotides
yhdE and mreD are separated by 8 nucleotides
mreD and mreC overlap by 1 nucleotides
mreC and mreB are separated by 65 nucleotides
BNILDI_01990: rng - ribonuclease G, at 393,393 to 394,862
rng
BNILDI_01995: yhdE - nucleoside triphosphate pyrophosphatase YhdE, at 394,852 to 395,445
yhdE
BNILDI_02000: mreD - rod shape-determining protein MreD, at 395,454 to 395,942
mreD
BNILDI_02005: mreC - rod shape-determining protein MreC, at 395,942 to 397,045
mreC
BNILDI_02010: mreB - rod shape-determining protein MreB, at 397,111 to 398,154
mreB
Group
Condition
BNILDI
_01990
BNILDI
_01995
BNILDI
_02000
BNILDI
_02005
BNILDI
_02010
rng
yhdE
mreD
mreC
mreB
carbon source
Sodium-DL-Lactate
-0.8
-0.1
N.D.
N.D.
N.D.
carbon source
L-Arabinose
-0.6
-0.0
N.D.
N.D.
N.D.
carbon source
Casamino-acids
-0.4
-0.1
N.D.
N.D.
N.D.
carbon source
Sodium-DL-Lactate
-0.4
+0.0
N.D.
N.D.
N.D.
phage
Bas61
-0.7
+0.3
N.D.
N.D.
N.D.
carbon source
Casamino-acids
-0.4
+0.1
N.D.
N.D.
N.D.
phage
Bas68
-0.3
-0.0
N.D.
N.D.
N.D.
carbon source
D-Glucose
-0.1
-0.1
N.D.
N.D.
N.D.
carbon source
L-Arabinose
-0.4
+0.1
N.D.
N.D.
N.D.
phage
JK38
-0.1
-0.2
N.D.
N.D.
N.D.
phage
JK36
-0.4
+0.2
N.D.
N.D.
N.D.
phage
RB68
-0.4
+0.3
N.D.
N.D.
N.D.
phage
JK36
-0.3
+0.2
N.D.
N.D.
N.D.
phage
MPec2
-0.1
+0.1
N.D.
N.D.
N.D.
phage
MPec2
-0.1
+0.1
N.D.
N.D.
N.D.
carbon source
D-Glucose
-0.1
+0.1
N.D.
N.D.
N.D.
phage
RB68
-0.3
+0.3
N.D.
N.D.
N.D.
phage
JK38
-0.0
+0.2
N.D.
N.D.
N.D.
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