Private Fitness
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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC62
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500 nt
rsmI and lpoA are separated by 63 nucleotides
lpoA and yraN overlap by 43 nucleotides
yraN and diaA are separated by 19 nucleotides
diaA and diaA are separated by 9 nucleotides
BNILDI_01495: rsmI - 16S rRNA (cytidine(1402)-2'-O)-methyltransferase, at 295,593 to 296,453
rsmI
BNILDI_01500: lpoA - penicillin-binding protein activator LpoA, at 296,517 to 298,553
lpoA
BNILDI_01505: yraN - YraN family protein, at 298,511 to 298,906
yraN
BNILDI_01510: diaA - DnaA initiator-associating protein DiaA, at 298,926 to 299,516
diaA
BNILDI_01515: diaA - DnaA initiator-associating protein DiaA, at 299,526 to 300,101
diaA
Group
Condition
BNILDI
_01495
BNILDI
_01500
BNILDI
_01505
BNILDI
_01510
BNILDI
_01515
rsmI
lpoA
yraN
diaA
diaA
phage
JK36
-0.3
+0.1
-1.0
-0.3
+0.0
phage
MPec2
-0.1
+0.2
-0.9
+0.2
-0.6
phage
Bas68
-0.1
+0.2
-0.1
-0.1
-0.6
carbon source
D-Glucose
-0.3
-0.3
-0.6
+0.3
+0.3
phage
MPec2
+0.3
+0.1
-0.6
-0.2
+0.1
carbon source
Casamino-acids
-0.1
-0.1
-0.2
+0.1
+0.0
carbon source
Sodium-DL-Lactate
-0.1
-0.1
-0.7
+0.5
+0.2
phage
JK38
+0.3
-0.0
-0.6
+0.2
-0.2
phage
JK38
+0.3
-0.1
-0.4
-0.1
+0.1
carbon source
L-Arabinose
-0.0
+0.0
-0.9
+0.5
+0.2
phage
Bas61
+0.3
-0.0
-0.2
+0.1
-0.1
carbon source
L-Arabinose
-0.1
-0.1
+0.0
+0.2
+0.1
carbon source
Sodium-DL-Lactate
+0.2
-0.0
-0.3
+0.3
-0.0
carbon source
D-Glucose
-0.0
-0.2
-0.2
+0.5
+0.1
carbon source
Casamino-acids
-0.2
-0.2
+0.4
+0.0
+0.3
phage
JK36
+0.2
+0.3
-0.6
+0.2
+0.6
phage
RB68
+0.9
-0.4
+0.2
+0.8
-0.3
phage
RB68
+0.9
-0.4
+1.1
+0.6
-0.4
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