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Homologs
Fitness for 5 genes in
Escherichia coli ECRC62
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500 nt
tsaD and rpsU are separated by 236 nucleotides
rpsU and dnaG are separated by 110 nucleotides
dnaG and rpoD are separated by 194 nucleotides
rpoD and mug are separated by 77 nucleotides
BNILDI_01055: tsaD - tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD, at 203,174 to 204,187
tsaD
BNILDI_01060: rpsU - 30S ribosomal protein S21, at 204,424 to 204,639
rpsU
BNILDI_01065: dnaG - DNA primase, at 204,750 to 206,495
dnaG
BNILDI_01070: rpoD - RNA polymerase sigma factor RpoD, at 206,690 to 208,531
rpoD
BNILDI_01075: mug - G/U mismatch-specific DNA glycosylase, at 208,609 to 209,115
mug
Group
Condition
BNILDI
_01055
BNILDI
_01060
BNILDI
_01065
BNILDI
_01070
BNILDI
_01075
tsaD
rpsU
dnaG
rpoD
mug
phage
Bas68
N.D.
N.D.
N.D.
N.D.
-0.4
carbon source
L-Arabinose
N.D.
N.D.
N.D.
N.D.
-0.3
carbon source
Casamino-acids
N.D.
N.D.
N.D.
N.D.
-0.2
phage
Bas61
N.D.
N.D.
N.D.
N.D.
-0.1
carbon source
Sodium-DL-Lactate
N.D.
N.D.
N.D.
N.D.
-0.1
carbon source
Sodium-DL-Lactate
N.D.
N.D.
N.D.
N.D.
-0.1
carbon source
Casamino-acids
N.D.
N.D.
N.D.
N.D.
-0.0
phage
JK38
N.D.
N.D.
N.D.
N.D.
-0.0
phage
JK36
N.D.
N.D.
N.D.
N.D.
+0.0
carbon source
D-Glucose
N.D.
N.D.
N.D.
N.D.
+0.0
phage
JK36
N.D.
N.D.
N.D.
N.D.
+0.0
phage
JK38
N.D.
N.D.
N.D.
N.D.
+0.1
phage
MPec2
N.D.
N.D.
N.D.
N.D.
+0.1
phage
MPec2
N.D.
N.D.
N.D.
N.D.
+0.2
carbon source
L-Arabinose
N.D.
N.D.
N.D.
N.D.
+0.2
carbon source
D-Glucose
N.D.
N.D.
N.D.
N.D.
+0.3
phage
RB68
N.D.
N.D.
N.D.
N.D.
+0.3
phage
RB68
N.D.
N.D.
N.D.
N.D.
+0.5
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