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Protein
Homologs
Fitness for 5 genes in
Bacteroides ovatus ATCC 8483
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
BACOVA_05587 and BACOVA_05588 are separated by 23 nucleotides
BACOVA_05588 and BACOVA_05589 overlap by 4 nucleotides
BACOVA_05589 and BACOVA_05590 overlap by 12 nucleotides
BACOVA_05590 and BACOVA_05591 are separated by 57 nucleotides
BACOVA_05587: BACOVA_05587 - DNA-binding helix-turn-helix protein, at 1,106,098 to 1,106,481
_05587
BACOVA_05588: BACOVA_05588 - hypothetical protein, at 1,106,505 to 1,106,594
_05588
BACOVA_05589: BACOVA_05589 - hypothetical protein, at 1,106,591 to 1,106,749
_05589
BACOVA_05590: BACOVA_05590 - VirE N-terminal domain protein, at 1,106,738 to 1,108,855
_05590
BACOVA_05591: BACOVA_05591 - hypothetical protein, at 1,108,913 to 1,109,071
_05591
Group
Condition
BACOVA
_05587
BACOVA
_05588
BACOVA
_05589
BACOVA
_05590
BACOVA
_05591
carbon source
Amylopectin from Potato 2.5 mg/mL (C)
-4.0
N.D.
N.D.
+0.0
N.D.
carbon source complex media
R2A 1 x (C) complex media
-2.4
N.D.
N.D.
+0.1
N.D.
carbon source
D-Mannose 10 mM (C)
-2.2
N.D.
N.D.
-0.0
N.D.
carbon source
Sucrose 10 mM (C)
-1.7
N.D.
N.D.
-0.2
N.D.
carbon source
Lentilan from mushroom 2.5 mg/mL (C)
-2.0
N.D.
N.D.
+0.1
N.D.
carbon source complex media
MRS 1 x (C) complex media
-1.8
N.D.
N.D.
-0.1
N.D.
carbon source
b-Mannan borohydrate reduced carob seed 2.5 mg/mL (C)
-1.9
N.D.
N.D.
+0.2
N.D.
carbon source
D-Arabinose 10 mM (C)
-2.0
N.D.
N.D.
+0.4
N.D.
carbon source complex media
Brucella 1 x (C) complex media
-1.8
N.D.
N.D.
+0.2
N.D.
carbon source
Pustulan (b-1-6 glucan) 2.5 mg/mL (C)
-1.4
N.D.
N.D.
-0.1
N.D.
carbon source
Wheat Arabinoxylan 2.5 mg/mL (C)
-1.5
N.D.
N.D.
-0.0
N.D.
carbon source
b-Glucan from Beet (1,2-b-Glucan) 2.5 mg/mL (C)
-1.4
N.D.
N.D.
-0.1
N.D.
carbon source
Arabinoxylan (Rye Flour) 2.5 mg/mL (C)
-1.6
N.D.
N.D.
+0.1
N.D.
carbon source
Xyloglucan from tamarind 2.5 mg/mL (C)
-1.5
N.D.
N.D.
+0.1
N.D.
carbon source
Locust bean gum 2.5 mg/mL (C)
-1.2
N.D.
N.D.
-0.2
N.D.
carbon source
Hyaluronic from Streptococcus equi 2.5 mg/mL (C)
-1.2
N.D.
N.D.
-0.1
N.D.
carbon source
Glucomannan (konjac) 2.5 mg/mL (C)
-1.5
N.D.
N.D.
+0.2
N.D.
carbon source
Wheat Arabinoxylan; filtered 1 mg/ml (C)
-1.6
N.D.
N.D.
+0.3
N.D.
carbon source complex media
GAM 1 x (C) complex media
-1.4
N.D.
N.D.
+0.1
N.D.
carbon source
Xylan from corn core 2.5 mg/mL (C)
-1.2
N.D.
N.D.
-0.2
N.D.
carbon source complex media
Yeast Extract 2.5 mg/mL (C) complex media
-1.3
N.D.
N.D.
+0.0
N.D.
carbon source
Arabinoxylan (Rye Flour) 2.5 mg/ml (C)
-1.4
N.D.
N.D.
+0.3
N.D.
carbon source
Arabinoxylan (Rye Flour) 0.5 mg/ml (C)
-1.3
N.D.
N.D.
+0.3
N.D.
carbon source
Wheat Arabinoxylan; filtered 1 mg/mL (C)
-1.2
N.D.
N.D.
+0.2
N.D.
carbon source
Hyaluronic from Streptococcus equi 2.5 mg/ml (C)
-1.3
N.D.
N.D.
+0.4
N.D.
carbon source
Xylan from Beechwood 2.5 mg/mL (C)
-1.2
N.D.
N.D.
+0.3
N.D.
carbon source
Glycogen from bovine liver 2.5 mg/mL (C)
-1.2
N.D.
N.D.
+0.3
N.D.
carbon source
Mucin from porcine stomach type II 2.5 mg/ml (C)
-1.1
N.D.
N.D.
+0.4
N.D.
carbon source
Glucomannan (konjac) 2.5 mg/ml (C)
-1.2
N.D.
N.D.
+0.5
N.D.
carbon source
amylopectin from maize 2.5 mg/ml (C)
+0.8
N.D.
N.D.
+0.7
N.D.
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