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Protein
Homologs
Fitness for 5 genes in
Bacteroides ovatus ATCC 8483
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
BACOVA_05029 and BACOVA_05030 are separated by 100 nucleotides
BACOVA_05030 and BACOVA_05031 are separated by 65 nucleotides
BACOVA_05031 and BACOVA_05032 are separated by 264 nucleotides
BACOVA_05032 and BACOVA_05033 overlap by 4 nucleotides
BACOVA_05029: BACOVA_05029 - hypothetical protein, at 496,811 to 499,342
_05029
BACOVA_05030: BACOVA_05030 - response regulator receiver domain protein, at 499,443 to 503,729
_05030
BACOVA_05031: BACOVA_05031 - glycosyl hydrolase, family 88, at 503,795 to 504,934
_05031
BACOVA_05032: BACOVA_05032 - nucleotidyltransferase domain protein, at 505,199 to 505,522
_05032
BACOVA_05033: BACOVA_05033 - HEPN domain protein, at 505,519 to 505,920
_05033
Group
Condition
BACOVA
_05029
BACOVA
_05030
BACOVA
_05031
BACOVA
_05032
BACOVA
_05033
carbon source
a-Cyclodextrin 2.5 mg/mL (C)
-0.1
-0.1
-0.3
-0.2
-0.2
carbon source
Xylan from Beechwood 2.5 mg/mL (C)
+0.1
+0.2
-0.3
-0.4
-0.2
carbon source
Dextran, Mw ~200,000 2.5 mg/ml (C)
+0.0
+0.0
-0.4
+0.2
-0.4
carbon source
Hyaluronic from Streptococcus equi 2.5 mg/ml (C)
-0.3
-0.0
+0.2
+0.2
-0.7
carbon source
a-Cyclodextrin 2.5 mg/ml (C)
+0.1
-0.0
-0.4
+0.3
-0.5
carbon source
Hyaluronic from Streptococcus equi 2.5 mg/mL (C)
-0.1
+0.1
+0.1
-0.3
-0.3
carbon source
amylopectin from maize 2.5 mg/mL (C)
-0.2
+0.2
-0.1
-0.2
-0.2
carbon source
L-Rhamnose 10 mM (C)
+0.2
-0.1
-0.2
-0.4
+0.1
carbon source
Lentilan from mushroom 2.5 mg/mL (C)
+0.1
+0.0
-0.2
-0.4
+0.1
carbon source
Pullulan 2.5 mg/mL (C)
-0.3
+0.1
+0.6
-0.4
-0.4
carbon source
L-Rhamnose 10 mM (C)
+0.2
-0.1
-0.1
-0.0
-0.3
carbon source complex media
Peptone 2.5 mg/mL (C) complex media
-0.0
+0.1
-0.1
-0.4
+0.1
carbon source
Glucomannan (konjac) 2.5 mg/ml (C)
+0.2
+0.0
-0.3
+0.1
-0.2
carbon source
D-Galactose 10 mM (C)
+0.1
+0.2
-0.2
-0.3
+0.0
carbon source
Pustulan (b-1-6 glucan) 2.5 mg/mL (C)
-0.0
+0.1
-0.3
-0.2
+0.3
carbon source
Wheat Arabinoxylan 2.5 mg/mL (C)
+0.1
+0.1
-0.1
-0.3
+0.2
carbon source
D-Arabinose 10 mM (C)
+0.2
+0.1
+0.1
-0.2
-0.2
carbon source
amylopectin from maize 2.5 mg/ml (C)
+0.0
+0.0
+0.0
+0.7
-0.6
carbon source
Lentilan from mushroom 2.5 mg/ml (C)
+0.1
-0.1
-0.3
+0.3
+0.2
carbon source
b-Glucan from Beet (1,2-b-Glucan) 2.5 mg/mL (C)
+0.1
+0.1
-0.1
-0.3
+0.3
carbon source
D-Xylose 10 mM (C)
+0.2
-0.0
-0.2
+0.1
+0.2
carbon source
B-glucan from yeast 2.5 mg/ml (C)
-0.2
-0.1
+0.2
+0.2
+0.1
carbon source
b-glucan from Barley 2.5 mg/ml (C)
-0.1
+0.0
-0.1
+0.4
+0.1
carbon source
Chondroitin sulfate A from bovine trachea 2.5 mg/ml (C)
+0.1
+0.0
-0.1
+0.4
-0.0
carbon source complex media
Yeast Extract 2.5 mg/mL (C) complex media
+0.0
-0.0
-0.1
+0.5
+0.1
carbon source
Arabinoxylan (Rye Flour) 0.5 mg/mL (C)
+0.0
+0.2
-0.1
+0.3
+0.3
carbon source
b-Mannan borohydrate reduced carob seed 2.5 mg/ml (C)
+0.2
+0.2
-0.0
+0.5
-0.1
carbon source
Pectin from apple; filtered 1 mg/ml (C)
+0.7
-0.2
+0.2
+0.3
+0.1
carbon source
b-Mannan borohydrate reduced carob seed 2.5 mg/mL (C)
+0.2
+0.1
+0.3
+0.4
+0.4
carbon source
Pectin from citrus peel; filtered 1 mg/ml (C)
+0.8
-0.0
+0.1
+0.4
+0.4
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