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Protein
Homologs
Fitness for 5 genes in
Bacteroides ovatus ATCC 8483
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
BACOVA_05003 and BACOVA_05002 overlap by 16 nucleotides
BACOVA_05002 and BACOVA_05004 are separated by 302 nucleotides
BACOVA_05004 and BACOVA_05005 are separated by 173 nucleotides
BACOVA_05005 and BACOVA_05006 are separated by 26 nucleotides
BACOVA_05003: BACOVA_05003 - hypothetical protein, at 456,872 to 457,066
_05003
BACOVA_05002: BACOVA_05002 - polygalacturonase (pectinase), at 457,051 to 458,361
_05002
BACOVA_05004: BACOVA_05004 - glycosyl hydrolase, family 88, at 458,664 to 461,093
_05004
BACOVA_05005: BACOVA_05005 - hypothetical protein, at 461,267 to 462,958
_05005
BACOVA_05006: BACOVA_05006 - fasciclin domain protein, at 462,985 to 465,258
_05006
Group
Condition
BACOVA
_05003
BACOVA
_05002
BACOVA
_05004
BACOVA
_05005
BACOVA
_05006
carbon source
Hyaluronic from Streptococcus equi 2.5 mg/ml (C)
-0.3
-0.4
+0.1
+0.1
-0.2
carbon source
Xylan from corncob 2.5 mg/mL (C)
-0.1
-0.1
+0.0
-0.1
-0.2
carbon source
D-Glucosamine Hydrochloride 10 mM (C)
-0.2
-0.2
-0.2
-0.1
+0.1
carbon source
Amylopectin from Potato 2.5 mg/mL (C)
-0.2
-0.1
+0.1
-0.1
-0.2
carbon source
Hyaluronic from Streptococcus equi 2.5 mg/mL (C)
-0.2
-0.4
+0.2
+0.4
-0.3
carbon source
Pullulan 2.5 mg/mL (C)
+0.1
-0.2
+0.1
+0.3
-0.5
carbon source
B-glucan from yeast 2.5 mg/mL (C)
-0.2
-0.1
+0.2
+0.2
-0.2
carbon source
a-Cyclodextrin 2.5 mg/mL (C)
+0.1
+0.1
+0.1
-0.2
-0.1
carbon source
NAG 10 mM (C)
-0.3
+0.0
+0.4
+0.2
-0.2
carbon source
Wheat Arabinoxylan 2.5 mg/mL (C)
-0.1
+0.0
+0.2
+0.3
-0.1
carbon source
D-Galactose 10 mM (C)
+0.1
+0.0
+0.1
+0.2
-0.2
carbon source
b-Glucan from Oat 2.5 mg/mL (C)
+0.0
+0.2
+0.2
-0.0
-0.1
carbon source
a-Cyclodextrin 2.5 mg/ml (C)
+0.2
+0.3
-0.0
-0.1
-0.1
carbon source
Laminarin from Laminaria digitata 2.5 mg/mL (C)
+0.2
+0.1
+0.2
+0.0
-0.2
carbon source
Wheat Arabinoxylan; filtered 1 mg/ml (C)
-0.1
+0.2
+0.1
+0.1
+0.1
carbon source
Dextran, Mw ~200,000 2.5 mg/ml (C)
+0.3
+0.2
-0.1
-0.0
+0.0
carbon source
Arabinoxylan (Rye Flour) 2.5 mg/mL (C)
+0.2
+0.1
+0.2
+0.1
-0.1
carbon source
amylopectin from maize 2.5 mg/ml (C)
+0.2
+0.0
+0.3
-0.1
+0.2
carbon source
D-Arabinose 10 mM (C)
+0.5
+0.2
+0.1
-0.2
+0.0
carbon source
Xylan from Beechwood 2.5 mg/mL (C)
+0.2
+0.1
+0.2
+0.2
-0.0
carbon source
Wheat Arabinoxylan; filtered 1 mg/mL (C)
+0.2
+0.2
+0.2
+0.2
-0.1
carbon source
b-Glucan from Oat 2.5 mg/ml (C)
+0.2
+0.2
+0.2
+0.1
+0.1
carbon source
Pectic galactan from potato 2.5 mg/mL (C)
+0.1
+0.3
+0.2
+0.1
-0.0
carbon source
polygalacturonic 2.5 mg/mL (C)
+0.3
+0.5
+0.2
-0.0
-0.3
carbon source
Xylan from Beechwood 2.5 mg/mL (C)
+0.3
+0.3
+0.2
+0.0
-0.0
carbon source
Pectic galactan from potato 2.5 mg/mL (C)
+0.2
+0.4
+0.2
+0.2
-0.0
carbon source
Pectin from apple; filtered 1 mg/ml (C)
+0.7
+1.1
-0.3
-0.1
-0.4
carbon source
Arabinoxylan (Rye Flour) 0.5 mg/mL (C)
+0.2
+0.3
+0.3
+0.3
+0.1
carbon source
NAG 10 mM (C)
+0.6
+0.1
+0.3
+0.1
+0.0
carbon source
Pectin from citrus peel; filtered 1 mg/ml (C)
+0.7
+0.9
+0.1
-0.1
-0.4
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