Fitness for 5 genes in Bacteroides ovatus ATCC 8483

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500 ntBACOVA_04964 and BACOVA_04965 are separated by 21 nucleotidesBACOVA_04965 and BACOVA_04966 are separated by 80 nucleotidesBACOVA_04966 and BACOVA_04967 are separated by 181 nucleotidesBACOVA_04967 and BACOVA_04968 overlap by 20 nucleotides BACOVA_04964: BACOVA_04964 - TonB-linked outer membrane protein, SusC/RagA family, at 403,919 to 406,969 _04964 BACOVA_04965: BACOVA_04965 - SusD family protein, at 406,991 to 408,712 _04965 BACOVA_04966: BACOVA_04966 - FG-GAP repeat protein, at 408,793 to 410,877 _04966 BACOVA_04967: BACOVA_04967 - hypothetical protein, at 411,059 to 414,457 _04967 BACOVA_04968: BACOVA_04968 - hypothetical protein, at 414,438 to 416,198 _04968
Group Condition BACOVA_04964 BACOVA_04965 BACOVA_04966 BACOVA_04967 BACOVA_04968
carbon source Pectin from apple; filtered 1 mg/ml (C) -0.8 -0.5 -0.6 -0.2 -0.2
carbon source Pectin from citrus peel; filtered 1 mg/ml (C) -0.8 -0.6 -0.3 +0.0 -0.2
carbon source Pectic galactan from potato 2.5 mg/mL (C) -0.6 -0.5 -0.4 +0.0 -0.2
carbon source Pectic galactan from potato 2.5 mg/mL (C) -0.6 -0.5 -0.4 +0.0 -0.0
carbon source Rhamnogalacturonan I from potato pectic fiber 2.5 mg/mL (C) -0.3 -0.4 -0.3 +0.1 -0.1
carbon source D-Glucosamine Hydrochloride 10 mM (C) -0.0 -0.4 -0.3 -0.2 -0.1
carbon source Polygalacturonic 2.5 mg/mL (C) -0.2 -0.3 -0.2 -0.0 -0.2
carbon source Rhamnogalacturonan I from potato pectic fiber 2.5 mg/ml (C) -0.2 -0.4 -0.2 +0.1 -0.0
carbon source Xylan from Beechwood 2.5 mg/mL (C) -0.3 -0.3 -0.0 -0.0 -0.1
carbon source Xylan from Beechwood 2.5 mg/mL (C) -0.4 -0.3 -0.1 +0.1 -0.0
carbon source Galactan from Potato 2.5 mg/mL (C) -0.2 -0.3 -0.1 +0.0 -0.1
carbon source Polygalacturonic 2.5 mg/mL (C) -0.3 -0.2 -0.1 +0.0 -0.0
carbon source Glucomannan (konjac) 2.5 mg/mL (C) -0.2 -0.1 +0.1 -0.1 -0.3
carbon source Wheat Arabinoxylan 2.5 mg/mL (C) -0.1 -0.3 +0.1 +0.1 -0.1
carbon source a-Cyclodextrin 2.5 mg/mL (C) -0.2 -0.1 +0.3 -0.2 -0.1
carbon source Galactan from Potato 2.5 mg/mL (C) -0.2 -0.2 -0.1 +0.1 +0.1
carbon source Wheat Arabinoxylan 2.5 mg/mL (C) -0.2 -0.2 +0.2 +0.0 -0.0
carbon source beta-Cyclodextrin 2.5 mg/mL (C) -0.1 -0.1 +0.2 -0.0 -0.2
carbon source D-Glucose 10 mM (C) -0.3 -0.1 +0.1 -0.0 +0.1
carbon source Pustulan (b-1-6 glucan) 2.5 mg/mL (C) +0.1 +0.2 +0.0 -0.2 -0.1
carbon source D-Xylose 10 mM (C) -0.1 -0.1 +0.1 +0.2 -0.1
carbon source complex media Peptone 2.5 mg/mL (C) complex media -0.1 +0.1 +0.2 +0.0 -0.3
carbon source Pullulan 2.5 mg/mL (C) -0.0 +0.1 -0.1 -0.1 +0.2
carbon source D-Arabinose 10 mM (C) -0.1 +0.0 -0.2 +0.0 +0.3
carbon source b-Glucan from Oat 2.5 mg/mL (C) -0.2 +0.0 +0.3 -0.0 +0.1
carbon source amylopectin from maize 2.5 mg/mL (C) -0.1 +0.3 +0.2 +0.1 -0.1
carbon source complex media Columbia 1 x (C) complex media +0.1 -0.1 +0.1 -0.0 +0.4
carbon source Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/mL (C) +0.4 +0.3 +0.3 +0.0 -0.1
carbon source Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/ml (C) +0.3 +0.2 +0.2 +0.0 +0.1
carbon source amylopectin from maize 2.5 mg/ml (C) +0.0 +0.3 +0.2 +0.1 +0.3
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