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Protein
Homologs
Fitness for 5 genes in
Bacteroides ovatus ATCC 8483
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
BACOVA_04291 and BACOVA_04292 are separated by 195 nucleotides
BACOVA_04292 and BACOVA_04293 are separated by 30 nucleotides
BACOVA_04293 and BACOVA_04294 are separated by 10 nucleotides
BACOVA_04294 and BACOVA_04295 are separated by 62 nucleotides
BACOVA_04291: BACOVA_04291 - peptidase, M23 family, at 178,894 to 180,549
_04291
BACOVA_04292: BACOVA_04292 - hypothetical protein, at 180,745 to 183,378
_04292
BACOVA_04293: BACOVA_04293 - TonB-linked outer membrane protein, SusC/RagA family, at 183,409 to 186,756
_04293
BACOVA_04294: BACOVA_04294 - SusD family protein, at 186,767 to 188,104
_04294
BACOVA_04295: BACOVA_04295 - hypothetical protein, at 188,167 to 188,265
_04295
Group
Condition
BACOVA
_04291
BACOVA
_04292
BACOVA
_04293
BACOVA
_04294
BACOVA
_04295
carbon source
Dextran, Mw ~200,000 2.5 mg/mL (C)
-0.1
+0.1
+0.1
+0.3
-1.7
carbon source
Polygalacturonic 2.5 mg/mL (C)
-0.2
+0.1
+0.0
+0.0
-1.1
carbon source complex media
Brucella 1 x (C) complex media
-0.4
+0.1
-0.0
-0.1
-0.7
carbon source
Xylan from Beechwood 2.5 mg/mL (C)
-0.1
+0.2
-0.1
+0.1
-1.1
carbon source
Galactomannan from guar 2.5 mg/mL (C)
-0.1
+0.1
-0.0
-0.1
-0.8
carbon source
amylopectin from maize 2.5 mg/ml (C)
+0.1
+0.3
+0.0
+0.3
-1.5
carbon source
Arabinoxylan (Rye Flour) 0.5 mg/mL (C)
+0.1
+0.1
+0.1
+0.1
-1.2
carbon source complex media
LB 1 x (C) complex media
-0.1
+0.0
-0.0
+0.2
-0.7
carbon source
D-Arabinose 10 mM (C)
+0.0
+0.2
+0.2
-0.0
-0.9
carbon source
D-Mannose 10 mM (C)
+0.1
+0.2
-0.0
+0.2
-0.7
carbon source
b-Glucan from Oat 2.5 mg/mL (C)
-0.0
+0.2
-0.0
+0.3
-0.6
carbon source
Arabinoxylan (Rye Flour) 0.5 mg/ml (C)
+0.1
+0.1
+0.1
+0.1
-0.5
carbon source
Dextran, Mw ~200,000 2.5 mg/ml (C)
-0.1
+0.3
+0.3
+0.4
-0.7
carbon source
Rhamnogalacturonan I from potato pectic fiber 2.5 mg/mL (C)
-0.3
+0.0
+0.1
-0.1
+0.5
carbon source
D-Galactose 10 mM (C)
+0.7
+0.1
+0.0
-0.1
-0.5
carbon source
D-Glucosamine Hydrochloride 10 mM (C)
-0.3
-0.3
-0.0
+0.1
+0.8
carbon source
D-Galactose 10 mM (C)
+0.6
+0.1
+0.2
-0.1
-0.4
carbon source
beta-Cyclodextrin 2.5 mg/mL (C)
+0.1
+0.2
+0.0
+0.3
-0.3
carbon source complex media
Peptone 2.5 mg/mL (C) complex media
+0.3
+0.1
+0.1
-0.1
+0.4
carbon source
D-Maltose 10 mM (C)
+0.2
+0.1
-0.0
+0.0
+0.5
carbon source
b-glucan from Barley 2.5 mg/ml (C)
+0.3
+0.3
+0.3
+0.3
-0.2
carbon source
L-Rhamnose 10 mM (C)
+0.3
+0.1
+0.2
+0.2
+0.4
carbon source
Hyaluronic from Streptococcus equi 2.5 mg/ml (C)
+0.2
-0.1
+0.1
-0.0
+0.9
carbon source
amylopectin from maize 2.5 mg/mL (C)
+0.3
+0.1
+0.1
+0.6
+0.2
carbon source
Pullulan 2.5 mg/mL (C)
+0.2
+0.3
+0.2
+0.3
+0.4
carbon source
b-Glucan from Oat 2.5 mg/ml (C)
+0.1
+0.2
+0.1
+0.3
+0.8
carbon source
a-Cyclodextrin 2.5 mg/mL (C)
+0.2
+0.3
+0.3
+0.2
+0.5
carbon source
Xylan from corncob 2.5 mg/ml (C)
+0.3
+0.1
-0.0
+0.1
+1.3
carbon source
a-Cyclodextrin 2.5 mg/ml (C)
+0.4
+0.4
+0.2
+0.4
+0.4
carbon source
NAG 10 mM (C)
+0.3
+0.2
+0.1
+0.1
+1.1
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