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Protein
Homologs
Fitness for 5 genes in
Bacteroides ovatus ATCC 8483
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
BACOVA_04190 and BACOVA_04191 overlap by 4 nucleotides
BACOVA_04191 and BACOVA_04192 are separated by 277 nucleotides
BACOVA_04192 and BACOVA_04193 are separated by 218 nucleotides
BACOVA_04193 and BACOVA_04194 are separated by 303 nucleotides
BACOVA_04190: BACOVA_04190 - kelch repeat protein, at 67,116 to 68,183
_04190
BACOVA_04191: BACOVA_04191 - transcriptional regulator, GntR family, at 68,180 to 68,950
_04191
BACOVA_04192: BACOVA_04192 - YbaK/proline--tRNA ligase associated domain protein, at 69,228 to 69,791
_04192
BACOVA_04193: BACOVA_04193 - hypothetical protein, at 70,010 to 70,114
_04193
BACOVA_04194: BACOVA_04194 - efflux ABC transporter, permease protein, at 70,418 to 72,838
_04194
Group
Condition
BACOVA
_04190
BACOVA
_04191
BACOVA
_04192
BACOVA
_04193
BACOVA
_04194
carbon source
amylopectin from maize 2.5 mg/ml (C)
-0.6
-0.7
-0.2
-2.4
-0.0
carbon source
b-glucan from Barley 2.5 mg/ml (C)
-0.4
+0.2
+0.0
-3.1
-0.1
carbon source
D-Arabinose 10 mM (C)
+0.1
-0.1
-0.1
-3.0
+0.1
carbon source
Tara gum 2.5 mg/ml (C)
-0.2
+0.0
-0.3
-1.9
+0.0
carbon source
D-Maltose 10 mM (C)
-0.1
-0.0
-0.0
-2.2
+0.1
carbon source complex media
ABB 1 x (C) complex media
-0.0
+0.2
-0.2
-1.8
-0.0
carbon source
D-Raffinose 10 mM (C)
-0.1
+0.2
+0.1
-2.1
+0.0
carbon source complex media
R2A 1 x (C) complex media
-0.2
+0.3
-0.3
-1.7
+0.0
carbon source
Lentilan from mushroom 2.5 mg/mL (C)
-0.2
+0.0
-0.1
-1.5
+0.0
carbon source complex media
ABB 1 x (C) complex media
-0.0
-0.1
+0.0
-1.6
-0.1
carbon source
polygalacturonic 2.5 mg/ml (C)
-0.2
-0.1
-0.1
-1.3
-0.1
carbon source
Pectin from apple; filtered 1 mg/ml (C)
-0.3
-0.1
+0.0
-1.2
-0.2
carbon source
b-Glucan from Oat 2.5 mg/ml (C)
-0.3
+0.2
+0.1
-1.4
-0.1
carbon source
Xylan from Beechwood 2.5 mg/mL (C)
-0.3
-0.2
+0.1
-0.8
-0.2
carbon source complex media
LB 1 x (C) complex media
-0.0
+0.0
+0.1
-1.5
+0.0
carbon source
a-Cyclodextrin 2.5 mg/ml (C)
-0.3
-0.3
+0.1
-0.7
-0.2
carbon source
D-Mannose 10 mM (C)
-0.0
+0.2
+0.0
-1.4
+0.0
carbon source
Lentilan from mushroom 2.5 mg/ml (C)
-0.3
+0.2
-0.1
-0.9
-0.0
carbon source complex media
Columbia 1 x (C) complex media
-0.1
+0.1
+0.0
-1.1
-0.2
carbon source
NAG 10 mM (C)
+0.0
+0.3
-0.1
-1.2
-0.1
carbon source
D-Glucose 10 mM (C)
+0.0
+0.3
+0.0
-1.4
+0.1
carbon source
Hyaluronic from Streptococcus equi 2.5 mg/ml (C)
-0.1
-0.2
+0.2
-1.1
+0.3
carbon source
Pustulan (b-1-6 glucan) 2.5 mg/mL (C)
-0.5
-0.5
-0.2
+0.3
+0.1
carbon source
Dextran, Mw ~200,000 2.5 mg/mL (C)
-0.4
-0.5
+0.0
+0.7
+0.0
carbon source
Glycogen from bovine liver 2.5 mg/mL (C)
-0.2
-0.3
+0.0
+0.8
-0.1
carbon source
a-Cyclodextrin 2.5 mg/mL (C)
-0.4
-0.3
+0.3
+1.0
-0.3
carbon source
Wheat Arabinoxylan; filtered 1 mg/mL (C)
-0.2
-0.5
-0.1
+1.0
-0.0
carbon source
Hyaluronic from Streptococcus equi 2.5 mg/mL (C)
-0.2
-0.2
+0.2
+0.5
+0.4
carbon source
Pectic galactan from potato 2.5 mg/mL (C)
-0.3
+0.0
+0.1
+1.2
-0.1
carbon source
amylopectin from maize 2.5 mg/mL (C)
-0.4
+0.1
+0.4
+1.4
-0.2
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