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Protein
Homologs
Fitness for 5 genes in
Bacteroides ovatus ATCC 8483
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
BACOVA_03038 and BACOVA_03039 are separated by 112 nucleotides
BACOVA_03039 and BACOVA_03040 are separated by 68 nucleotides
BACOVA_03040 and BACOVA_03041 are separated by 76 nucleotides
BACOVA_03041 and BACOVA_03042 are separated by 0 nucleotides
BACOVA_03038: BACOVA_03038 - transcriptional regulator, GntR family, at 113,294 to 114,706
_03038
BACOVA_03039: BACOVA_03039 - hypothetical protein, at 114,819 to 114,923
_03039
BACOVA_03040: BACOVA_03040 - hypothetical protein, at 114,992 to 115,111
_03040
BACOVA_03041: BACOVA_03041 - hypothetical protein, at 115,188 to 115,304
_03041
BACOVA_03042: BACOVA_03042 - transcriptional regulator, effector binding domain protein, at 115,305 to 115,775
_03042
Group
Condition
BACOVA
_03038
BACOVA
_03039
BACOVA
_03040
BACOVA
_03041
BACOVA
_03042
carbon source
Dextran, Mw ~200,000 2.5 mg/ml (C)
+0.1
-0.4
-0.9
-1.3
-0.3
carbon source
NAG 10 mM (C)
-0.1
-0.2
-1.1
-0.8
-0.0
carbon source
b-glucan from Barley 2.5 mg/ml (C)
+0.0
-0.2
-0.6
-1.1
-0.1
carbon source
Pectin from citrus peel; filtered 1 mg/ml (C)
+0.0
-0.3
-0.3
-1.2
-0.3
carbon source
Xylan from Beechwood 2.5 mg/mL (C)
+0.2
-0.1
-0.2
-1.6
-0.1
carbon source
a-Cyclodextrin 2.5 mg/ml (C)
-0.0
-0.1
-1.4
-0.1
-0.2
carbon source
amylopectin from maize 2.5 mg/ml (C)
+0.3
-0.5
-0.4
-0.8
-0.4
carbon source
b-Glucan from Oat 2.5 mg/ml (C)
+0.1
-0.0
-0.9
-0.7
-0.2
carbon source
Pustulan (b-1-6 glucan) 2.5 mg/mL (C)
-0.0
-0.3
-0.9
-0.2
-0.3
carbon source
D-Glucosamine Hydrochloride 10 mM (C)
-0.1
+0.5
-1.4
-0.1
-0.6
carbon source
D-Galactose 10 mM (C)
-0.1
-0.0
+0.2
-1.6
-0.0
carbon source
b-Mannan borohydrate reduced carob seed 2.5 mg/mL (C)
+0.1
-0.2
-0.5
-1.0
-0.0
carbon source
b-Glucan from Oat 2.5 mg/mL (C)
+0.1
-0.1
-0.5
-1.0
-0.0
carbon source
Dextran, Mw ~200,000 2.5 mg/mL (C)
+0.3
+0.1
-0.3
-1.8
+0.2
carbon source
amylopectin from maize 2.5 mg/mL (C)
+0.1
-0.3
-0.8
-0.6
+0.1
carbon source
beta-Cyclodextrin 2.5 mg/mL (C)
-0.1
+0.4
-1.0
-0.8
-0.2
carbon source
b-Mannan borohydrate reduced carob seed 2.5 mg/ml (C)
+0.2
-0.5
-0.5
-0.7
-0.1
carbon source
Wheat Arabinoxylan 2.5 mg/mL (C)
+0.1
+0.2
-1.0
-0.5
-0.2
carbon source
a-Cyclodextrin 2.5 mg/mL (C)
+0.0
+0.1
-0.7
-0.7
-0.1
carbon source
Pectic galactan from potato 2.5 mg/mL (C)
-0.1
+0.1
-0.7
-0.8
+0.1
carbon source
D-Xylose 10 mM (C)
+0.0
-0.3
+0.3
-0.9
-0.4
carbon source
beta-Cyclodextrin 2.5 mg/mL (C)
+0.2
+0.2
-1.1
-0.3
-0.1
carbon source
Xylan from Beechwood 2.5 mg/mL (C)
+0.0
+0.4
-0.8
-0.3
-0.4
carbon source
polygalacturonic 2.5 mg/ml (C)
+0.1
+0.1
+0.2
-0.9
-0.6
carbon source complex media
GAM 1 x (C) complex media
-0.0
+0.2
+0.1
-1.2
-0.1
carbon source
Xyloglucan from tamarind 2.5 mg/mL (C)
-0.1
+0.5
-0.6
-0.6
-0.3
carbon source
D-Arabinose 10 mM (C)
+0.3
+0.6
-0.8
-1.0
+0.4
carbon source complex media
Peptone 2.5 mg/mL (C) complex media
+0.3
+0.2
-1.2
+0.1
+0.1
carbon source
pectate 2.5 mg/ml (C)
+0.0
+0.3
+0.3
-0.7
-0.3
carbon source
Hyaluronic from Streptococcus equi 2.5 mg/ml (C)
+0.4
-0.8
+0.3
+0.4
-0.0
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