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Protein
Homologs
Fitness for 5 genes in
Bacteroides ovatus ATCC 8483
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
BACOVA_02308 and BACOVA_02309 are separated by 67 nucleotides
BACOVA_02309 and BACOVA_02310 are separated by 12 nucleotides
BACOVA_02310 and BACOVA_02312 are separated by 23 nucleotides
BACOVA_02312 and BACOVA_02311 overlap by 68 nucleotides
BACOVA_02308: BACOVA_02308 - protein TraX, at 76,784 to 77,491
_02308
BACOVA_02309: BACOVA_02309 - DNA-binding helix-turn-helix protein, at 77,559 to 77,843
_02309
BACOVA_02310: BACOVA_02310 - hypothetical protein, at 77,856 to 78,038
_02310
BACOVA_02312: BACOVA_02312 - hypothetical protein, at 78,062 to 78,805
_02312
BACOVA_02311: BACOVA_02311 - hypothetical protein, at 78,738 to 78,881
_02311
Group
Condition
BACOVA
_02308
BACOVA
_02309
BACOVA
_02310
BACOVA
_02312
BACOVA
_02311
carbon source
D-Glucosamine Hydrochloride 10 mM (C)
+0.6
+0.4
-3.5
-0.3
-3.8
carbon source
amylopectin from maize 2.5 mg/mL (C)
-0.3
+0.7
-1.0
-0.1
-4.9
carbon source
D-Galactose 10 mM (C)
-0.4
+0.5
-0.6
+0.2
-4.8
carbon source
Dextran, Mw ~200,000 2.5 mg/mL (C)
+0.1
-0.2
-3.0
+0.3
-1.6
carbon source
D-Raffinose 10 mM (C)
+0.0
-0.3
-1.4
-0.1
-2.5
carbon source
Pustulan (b-1-6 glucan) 2.5 mg/mL (C)
-0.2
+0.3
-2.3
-0.0
-2.0
carbon source complex media
Columbia 1 x (C) complex media
-0.1
+0.0
-2.1
-0.2
-1.7
carbon source
Rhamnogalacturonan I from potato pectic fiber 2.5 mg/mL (C)
-0.1
-0.4
-0.3
-0.3
-2.6
carbon source complex media
GAM 1 x (C) complex media
-0.4
-0.3
-1.2
-0.3
-1.5
carbon source
Wheat Arabinoxylan 2.5 mg/mL (C)
-0.2
+0.3
-1.0
-0.0
-2.6
carbon source
Xylan from corncob 2.5 mg/mL (C)
-0.2
-0.4
-0.5
-0.1
-2.5
carbon source
Xylan from Beechwood 2.5 mg/mL (C)
-0.2
+0.2
-0.9
-0.1
-2.6
carbon source
Arabinoxylan (Rye Flour) 2.5 mg/ml (C)
-0.1
+0.4
-1.3
+0.2
-2.7
carbon source
b-Glucan from Oat 2.5 mg/mL (C)
+0.1
+0.0
-2.6
-0.1
-0.9
carbon source
Arabinoxylan (Rye Flour) 0.5 mg/ml (C)
-0.3
-0.1
+0.0
+0.4
-3.2
carbon source complex media
Brucella 1 x (C) complex media
-0.3
-0.2
+0.0
-0.0
-2.8
carbon source
L-Rhamnose 10 mM (C)
-0.2
-0.2
-0.9
+0.1
-2.0
carbon source
Lentilan from mushroom 2.5 mg/mL (C)
-0.0
+0.1
-1.2
+0.1
-2.1
carbon source complex media
GAM 1 x (C) complex media
-0.1
-0.2
-1.3
+0.0
-1.5
carbon source
Galactan from Potato 2.5 mg/mL (C)
-0.2
+0.2
-1.6
-0.1
-1.3
carbon source
Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/mL (C)
-0.1
+0.2
-1.4
-0.0
-1.6
carbon source
D-Raffinose 10 mM (C)
-0.2
+0.2
+0.4
-0.1
-3.2
carbon source
a-Cyclodextrin 2.5 mg/mL (C)
-0.2
-0.0
+0.2
-0.1
-2.7
carbon source
B-glucan from yeast 2.5 mg/mL (C)
+0.2
+0.2
-1.4
-0.2
-1.6
carbon source
b-glucan from Barley 2.5 mg/ml (C)
-0.0
+0.3
-1.0
+0.3
-2.3
carbon source
Xylan from corn core 2.5 mg/mL (C)
+0.1
+0.5
-0.9
-0.1
-2.2
carbon source
Glucomannan (konjac) 2.5 mg/ml (C)
-0.4
-0.1
-0.7
+0.3
-1.8
carbon source
Arabinoxylan (Rye Flour) 0.5 mg/mL (C)
-0.4
+0.4
-1.3
-0.1
-1.1
carbon source
Lentilan from mushroom 2.5 mg/ml (C)
-0.1
+0.3
-0.2
+0.1
-2.5
carbon source
D-Arabinose 10 mM (C)
-0.7
+0.6
-0.1
+1.1
+1.0
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