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Protein
Homologs
Fitness for 5 genes in
Bacteroides ovatus ATCC 8483
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
BACOVA_00921 and BACOVA_00922 are separated by 30 nucleotides
BACOVA_00922 and BACOVA_00923 are separated by 149 nucleotides
BACOVA_00923 and BACOVA_00924 are separated by 282 nucleotides
BACOVA_00924 and BACOVA_00925 are separated by 7 nucleotides
BACOVA_00921: BACOVA_00921 - sigma factor regulatory protein, FecR/PupR family, at 58,108 to 58,818
_00921
BACOVA_00922: BACOVA_00922 - hypothetical protein, at 58,849 to 59,049
_00922
BACOVA_00923: BACOVA_00923 - RNA polymerase sigma-70 factor, at 59,199 to 59,765
_00923
BACOVA_00924: BACOVA_00924 - hypothetical protein, at 60,048 to 60,152
_00924
BACOVA_00925: BACOVA_00925 - putative DNA-binding protein, at 60,160 to 60,783
_00925
Group
Condition
BACOVA
_00921
BACOVA
_00922
BACOVA
_00923
BACOVA
_00924
BACOVA
_00925
carbon source
Hyaluronic from Streptococcus equi 2.5 mg/ml (C)
-0.2
-0.0
-0.4
-1.6
-0.7
carbon source
Pustulan (b-1-6 glucan) 2.5 mg/mL (C)
-0.1
-0.6
-0.1
-1.2
-0.4
carbon source complex media
Peptone 2.5 mg/mL (C) complex media
+0.0
-0.0
-0.3
-1.3
-0.1
carbon source
Tara gum 2.5 mg/ml (C)
-0.5
-0.1
-0.2
-0.9
+0.0
carbon source
b-Mannan borohydrate reduced carob seed 2.5 mg/ml (C)
-0.4
-0.2
+0.2
-0.5
-0.4
carbon source
Wheat Arabinoxylan; filtered 1 mg/ml (C)
-0.4
-0.0
+0.1
-1.2
+0.2
carbon source
Pullulan 2.5 mg/mL (C)
+0.2
-0.5
+0.1
-1.1
+0.1
carbon source
Galactan from Potato 2.5 mg/mL (C)
+0.1
-0.2
+0.1
-0.9
-0.2
carbon source
Arabinoxylan (Rye Flour) 0.5 mg/ml (C)
-0.2
+0.3
+0.0
-1.0
-0.1
carbon source
Wheat Arabinoxylan; filtered 1 mg/mL (C)
-0.2
-0.2
+0.3
-0.8
-0.0
carbon source
D-Arabinose 10 mM (C)
+0.1
+0.2
-0.6
-0.7
+0.2
carbon source
NAG 10 mM (C)
+0.3
+0.2
+0.1
-1.5
+0.0
carbon source
NAG 10 mM (C)
+0.6
-0.4
+0.0
-0.5
-0.1
carbon source
D-Galactose 10 mM (C)
+0.5
+0.2
-0.2
-0.4
-0.4
carbon source
Galactomannan from guar 2.5 mg/mL (C)
-0.2
-0.4
-0.2
+0.8
-0.1
carbon source
b-Glucan from Oat 2.5 mg/ml (C)
-0.2
+0.1
-0.4
+0.7
+0.2
carbon source
b-glucan from Barley 2.5 mg/ml (C)
-0.5
-0.1
-0.1
+1.0
+0.0
carbon source
D-Mannose 10 mM (C)
-0.1
+0.0
-0.4
+0.8
+0.2
carbon source
b-Glucan from Oat 2.5 mg/mL (C)
-0.3
+0.4
-0.3
+0.2
+0.5
carbon source
a-Cyclodextrin 2.5 mg/mL (C)
-0.3
+0.1
-0.1
+1.2
-0.3
carbon source
amylopectin from maize 2.5 mg/mL (C)
+0.0
-0.1
-0.4
+1.0
+0.3
carbon source
D-Arabinose 10 mM (C)
+0.2
-0.4
+0.5
+0.4
+0.2
carbon source
Xylan from Beechwood 2.5 mg/mL (C)
-0.2
+0.0
-0.1
+0.9
+0.4
carbon source
Dextran, Mw ~200,000 2.5 mg/mL (C)
-0.2
+0.3
-0.0
+0.9
-0.1
carbon source
Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/mL (C)
+0.3
-0.2
+0.2
+0.7
+0.1
carbon source
b-Mannan borohydrate reduced carob seed 2.5 mg/mL (C)
-0.0
-0.0
+0.4
+1.1
-0.3
carbon source
Pectin from apple; filtered 1 mg/ml (C)
+0.4
+0.4
+0.5
-0.0
-0.1
carbon source
amylopectin from maize 2.5 mg/ml (C)
-0.5
+0.3
-0.3
+1.6
+0.2
carbon source
a-Cyclodextrin 2.5 mg/ml (C)
-0.2
+0.2
+0.0
+0.8
+0.4
carbon source
Pectin from citrus peel; filtered 1 mg/ml (C)
+0.2
+0.3
+0.5
+0.1
+0.4
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