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Protein
Homologs
Fitness for 5 genes in
Bacteroides ovatus ATCC 8483
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
BACOVA_00838 and BACOVA_00839 are separated by 34 nucleotides
BACOVA_00839 and BACOVA_00840 overlap by 4 nucleotides
BACOVA_00840 and BACOVA_00841 are separated by 145 nucleotides
BACOVA_00841 and BACOVA_00842 are separated by 144 nucleotides
BACOVA_00838: BACOVA_00838 - hypothetical protein, at 92,241 to 93,659
_00838
BACOVA_00839: BACOVA_00839 - SusD family protein, at 93,694 to 95,283
_00839
BACOVA_00840: BACOVA_00840 - TonB-linked outer membrane protein, SusC/RagA family, at 95,280 to 98,534
_00840
BACOVA_00841: BACOVA_00841 - sigma factor regulatory protein, FecR/PupR family, at 98,680 to 99,678
_00841
BACOVA_00842: BACOVA_00842 - RNA polymerase sigma-70 factor, at 99,823 to 100,398
_00842
Group
Condition
BACOVA
_00838
BACOVA
_00839
BACOVA
_00840
BACOVA
_00841
BACOVA
_00842
carbon source
Tara gum 2.5 mg/ml (C)
-0.2
-0.1
+0.2
-0.4
-0.3
carbon source
Pectic galactan from potato 2.5 mg/mL (C)
-0.3
-0.2
+0.1
-0.4
-0.0
carbon source
Glucomannan (konjac) 2.5 mg/mL (C)
-0.2
+0.0
+0.1
-0.4
-0.2
carbon source
Galactomannan from guar 2.5 mg/mL (C)
-0.3
-0.0
+0.2
-0.2
-0.2
carbon source complex media
Columbia 1 x (C) complex media
-0.3
-0.1
+0.1
-0.1
-0.2
carbon source complex media
GAM 1 x (C) complex media
-0.3
+0.2
+0.1
-0.3
-0.2
carbon source
amylopectin from maize 2.5 mg/ml (C)
-0.0
-0.3
+0.1
-0.8
+0.4
carbon source
b-Glucan from Beet (1,2-b-Glucan) 2.5 mg/mL (C)
-0.2
+0.1
+0.1
-0.2
-0.3
carbon source
Pectin from citrus peel; autoclaved 2.5 mg/mL (C)
+0.2
-0.1
+0.0
-0.2
-0.3
carbon source
Pustulan (b-1-6 glucan) 2.5 mg/mL (C)
-0.2
-0.2
+0.2
-0.3
-0.0
carbon source
Galactan from Potato 2.5 mg/mL (C)
-0.0
+0.1
+0.1
-0.2
-0.4
carbon source
a-Cyclodextrin 2.5 mg/ml (C)
-0.1
-0.1
+0.1
-0.7
+0.4
carbon source
Pectin from citrus peel; filtered 1 mg/ml (C)
+0.2
-0.1
-0.0
+0.1
-0.5
carbon source
b-glucan from Barley 2.5 mg/ml (C)
-0.1
-0.1
+0.1
-0.5
+0.3
carbon source
D-Glucosamine Hydrochloride 10 mM (C)
-0.4
-0.4
+0.3
+0.1
+0.2
carbon source
b-Mannan borohydrate reduced carob seed 2.5 mg/ml (C)
+0.0
-0.1
+0.2
-0.4
+0.1
carbon source
Dextran, Mw ~200,000 2.5 mg/ml (C)
-0.2
+0.0
+0.2
-0.5
+0.5
carbon source
Dextran, Mw ~200,000 2.5 mg/mL (C)
-0.1
+0.2
+0.0
-0.4
+0.3
carbon source
b-Glucan from Oat 2.5 mg/ml (C)
-0.2
-0.1
+0.3
-0.1
+0.2
carbon source
Polygalacturonic 2.5 mg/mL (C)
+0.3
+0.0
+0.2
-0.0
-0.3
carbon source
a-Cyclodextrin 2.5 mg/mL (C)
+0.2
-0.1
+0.2
-0.4
+0.2
carbon source
polygalacturonic 2.5 mg/mL (C)
+0.3
+0.1
+0.2
-0.2
+0.2
carbon source
Hyaluronic from Streptococcus equi 2.5 mg/ml (C)
+0.1
+0.2
+0.2
-0.1
+0.2
carbon source
amylopectin from maize 2.5 mg/mL (C)
+0.2
-0.1
+0.5
-0.2
+0.3
carbon source
Amylopectin from Potato 2.5 mg/mL (C)
+0.0
+0.3
+0.2
-0.3
+0.5
carbon source
D-Arabinose 10 mM (C)
+0.7
+0.3
-0.0
+0.2
-0.2
carbon source
D-Arabinose 10 mM (C)
+0.2
+0.4
+0.5
+0.1
-0.1
carbon source
Hyaluronic from Streptococcus equi 2.5 mg/mL (C)
+0.1
+0.3
+0.1
+0.1
+0.5
carbon source
Amylopectin from Potato 2.5 mg/mL (C)
+0.3
+0.3
+0.2
-0.1
+0.6
carbon source
Pullulan 2.5 mg/mL (C)
+0.6
+0.5
+0.2
+0.2
+0.4
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