Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu3582 and Atu3583 are separated by 17 nucleotidesAtu3583 and Atu8189 are separated by 34 nucleotidesAtu8189 and Atu3585 are separated by 125 nucleotidesAtu3585 and Atu3586 are separated by 103 nucleotides Atu3582: Atu3582 - hypothetical protein, at 638,787 to 639,206 Atu3582 Atu3583: Atu3583 - hypothetical protein, at 639,224 to 639,784 Atu3583 Atu8189: Atu8189 - hypothetical protein, at 639,819 to 640,196 Atu8189 Atu3585: Atu3585 - glutathione S-transferase, at 640,322 to 641,218 Atu3585 Atu3586: Atu3586 - propionyl-CoA carboxylase, at 641,322 to 642,854 Atu3586
Group Condition Atu3582 Atu3583 Atu8189 Atu3585 Atu3586
carbon source Propan-1-ol (C) -2.0 -2.5 -1.6 -2.5 -2.5
carbon source Propan-1-ol (C) -1.9 -2.2 -1.6 -2.4 -1.7
phage AgroPhage_C04 -0.6 +0.5 -1.0 -0.8 -0.6
phage AgroPhage_E10 -1.0 +0.2 -0.3 +0.0 -0.9
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.9 -0.5 +0.0 -0.3 -0.0
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 -0.7 -0.5 -0.5 +0.0
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 +0.4 -0.7 -0.2 -0.3
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -0.1 -1.2 -0.3 -0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 -1.1 -0.4 +0.3 +0.0
phage AgroPhage_F04 +0.3 -1.4 -0.3 -0.1 +0.2
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.8 -0.6 -0.0 +0.4 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 -0.5 -0.6 +0.5 -0.5
stress R2A with Nitrofurantoin 0.4 mg/mL +0.3 -0.1 +0.4 -1.0 -0.2
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -0.4 +0.6 -0.6 -0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.7 -0.6 -0.2 -0.2 +0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.8 +1.0 -0.8 -0.1 +0.6
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 -0.7 +0.6 +0.4 +0.2
phage AgroPhage_E04 -0.1 +0.3 -0.7 +0.7 -0.2
phage AgroPhage_A07 +0.6 +0.4 -0.6 -0.1 -0.2
phage AgroPhage_H04 +0.4 +0.2 -0.8 +0.1 +0.3
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 -0.2 -0.4 +0.4 -0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.5 +1.5 -0.2 +0.1 -0.6
stress R2A with Vancomycin 0.009 mM +0.4 -0.7 +0.1 +0.2 +0.5
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days +0.5 -0.4 -0.2 +0.4 +0.3
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 +0.8 +0.3 -0.2 +0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.5 +0.6 -0.3 +0.5 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.8 +0.1 +0.5 -0.2 +0.4
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 +0.6 -0.2 +0.0 +0.6
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.5 +0.4 +0.1 +0.7 +0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 +2.2 +1.6 -0.1 -0.3
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