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Protein
Homologs
Fitness for 5 genes in
Agrobacterium fabrum C58
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Atu2579 and Atu2580 are separated by 267 nucleotides
Atu2580 and Atu8180 are separated by 37 nucleotides
Atu8180 and Atu2582 are separated by 4 nucleotides
Atu2582 and Atu2583 are separated by 193 nucleotides
Atu2579: Atu2579 - metal dependant beta lactamase protein, at 2,553,448 to 2,554,308
Atu2579
Atu2580: Atu2580 - adenylate cyclase, at 2,554,576 to 2,556,270
Atu2580
Atu8180: Atu8180 - hypothetical protein, at 2,556,308 to 2,556,790
Atu8180
Atu2582: Atu2582 - UDP-glucose/GDP-mannose dehydrogenase, at 2,556,795 to 2,558,069
Atu2582
Atu2583: Atu2583 - glycosyltransferase, at 2,558,263 to 2,559,360
Atu2583
Group
Condition
Atu2579
Atu2580
Atu8180
Atu2582
Atu2583
stress
R2A with Nitrofurantoin 0.4 mg/mL
+0.4
+0.1
-3.1
-5.2
-5.3
stress
Pyrogallol 0.5 mM
+0.0
-0.0
-1.2
-5.4
-4.6
stress
R2A with Nitrofurantoin 0.4 mg/mL
+0.2
-0.0
-2.7
-3.9
-4.0
stress
R2A with hypochlorite 6.25 mM
-0.3
+0.3
-1.5
-4.5
-3.8
stress
Indole-3-butyric 5 mM
+0.2
+0.1
-0.7
-4.9
-4.2
stress
R2A with hypochlorite 6.25 mM
-0.2
-0.0
-1.1
-3.7
-3.7
stress
Pyrogallol 0.5 mM
+0.3
-0.2
-1.0
-4.0
-3.7
stress
Indole-3-butyric 5 mM
-0.0
+0.0
-0.6
-3.8
-3.8
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.3
+0.2
-0.1
-3.6
-4.3
stress
R2A with Nalidixic 0.02 mM
+0.5
+0.0
-0.8
-3.9
-3.3
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.6
+0.0
+0.1
-2.9
-4.1
stress
R2A with Carbenicillin 150 mM
+0.1
+0.0
-1.1
-2.9
-3.5
stress
Dodecyl Sulfate 0.2 mM
+0.0
+0.0
+0.2
-3.8
-3.9
stress
R2A with Nalidixic 0.02 mM
+0.3
-0.0
-0.5
-3.7
-2.9
stress
Cinnamic 1.25 mM
-0.1
+0.1
-1.1
-3.0
-2.6
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.1
-0.1
-0.6
-2.7
-3.1
stress
D(+)-Carvone 5 mM
-0.1
+0.1
-0.4
-2.9
-3.1
stress
D(+)-Carvone 5 mM
-0.0
+0.0
-0.5
-3.1
-2.7
stress
R2A with Ceftriaxone hemi(heptahydrate) 0.0005 mM
+1.9
-0.1
-1.9
-3.0
-3.0
stress
R2A with Ceftriaxone hemi(heptahydrate) 0.0005 mM
+2.1
+0.1
-2.3
-3.1
-2.9
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.2
+0.2
+0.0
-2.4
-3.5
stress
Cinnamic 1.25 mM
+0.1
+0.0
-0.8
-2.7
-2.3
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.2
-0.0
-0.0
-2.4
-3.0
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.3
+0.3
+0.2
-2.5
-3.0
lb_arabidopsis_leaf
LB_arabidopsis_leaf
-0.2
+0.1
-0.6
-2.3
-2.3
stress
R2A with Bacitracin 0.6 mM
+1.1
-0.0
-1.1
-1.4
-2.0
stress
R2A with Tetracycline 0.002 mM
+4.9
-0.1
-3.1
-1.9
-2.2
stress
R2A with Vancomycin 0.009 mM
+1.8
+0.2
-1.0
-1.5
-1.1
stress
R2A with Tetracycline 0.002 mM
+4.8
+0.2
-2.4
-1.8
-1.5
in planta
Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-1.2
+0.6
+0.9
+1.5
+1.7
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