Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1014 experiments or choose conditions or try the comparative fitness browser

500 ntAtu2046 and Atu2047 overlap by 4 nucleotidesAtu2047 and Atu8170 are separated by 92 nucleotidesAtu8170 and Atu8171 are separated by 741 nucleotidesAtu8171 and Atu2051 are separated by 376 nucleotides Atu2046: Atu2046 - dihydrofolate reductase, at 2,005,331 to 2,005,858 Atu2046 Atu2047: Atu2047 - thymidylate synthase, at 2,005,855 to 2,006,649 Atu2047 Atu8170: Atu8170 - hypothetical protein, at 2,006,742 to 2,007,050 Atu8170 Atu8171: Atu8171 - hypothetical protein, at 2,007,792 to 2,008,298 Atu8171 Atu2051: Atu2051 - hypothetical protein, at 2,008,675 to 2,008,884 Atu2051
Group Condition Atu2046 Atu2047 Atu8170 Atu8171 Atu2051
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -0.5 N.D. -1.1
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -1.1 N.D. -0.4
Atjh2 N.D. N.D. -0.4 N.D. -0.9
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -0.6 N.D. -0.7
phage phage 99.2 N.D. N.D. -0.4 N.D. -0.8
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -0.3 N.D. -0.9
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -0.3 N.D. -0.8
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -0.2 N.D. -0.9
lb_lettuce_leaf LB_Lettuce_Leaf N.D. N.D. -0.7 N.D. -0.4
phage AgroPhage_C04 N.D. N.D. -0.7 N.D. -0.3
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -0.6 N.D. -0.4
no phage P2L5 N.D. N.D. -0.6 N.D. -0.4
phage AgroPhage_C10 N.D. N.D. +0.3 N.D. -0.8
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days N.D. N.D. +0.3 N.D. -0.7
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. +0.5 N.D. -0.7
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -0.7 N.D. +0.6
stress R2A with tungstate 375 mM N.D. N.D. +0.6 N.D. -0.4
stress R2A with arsenate 50 mM N.D. N.D. +0.6 N.D. -0.4
in planta Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. N.D. +0.6 N.D. -0.4
nitrogen source Hydantoin (N) N.D. N.D. +0.7 N.D. -0.4
phage AgroPhage_D10 N.D. N.D. +0.8 N.D. -0.4
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. +0.8 N.D. -0.4
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -0.7 N.D. +1.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. +0.7 N.D. +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. N.D. +1.1 N.D. +0.1
nitrogen source DL-2-Aminobutyric (N) N.D. N.D. +1.4 N.D. -0.2
stress R2A with Vancomycin 0.009 mM N.D. N.D. +0.9 N.D. +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant N.D. N.D. +1.3 N.D. +0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. +0.4 N.D. +1.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. +1.0 N.D. +0.9
remove
Atu2046
plot		 remove
Atu2047
plot		 remove
Atu8170		 remove
Atu8171
plot		 remove
Atu2051
plot