Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1827 and Atu1828 are separated by 178 nucleotidesAtu1828 and Atu8167 are separated by 44 nucleotidesAtu8167 and Atu1830 are separated by 119 nucleotidesAtu1830 and Atu1831 are separated by 17 nucleotides Atu1827: Atu1827 - hypothetical protein, at 1,807,076 to 1,808,167 Atu1827 Atu1828: Atu1828 - tyrosyl-tRNA synthetase, at 1,808,346 to 1,809,599 Atu1828 Atu8167: Atu8167 - putative transmembrane protein, at 1,809,644 to 1,813,027 Atu8167 Atu1830: Atu1830 - bacterioferritin comigratory protein, at 1,813,147 to 1,813,614 Atu1830 Atu1831: Atu1831 - hypothetical protein, at 1,813,632 to 1,814,456 Atu1831
Group Condition Atu1827 Atu1828 Atu8167 Atu1830 Atu1831
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 -0.2 N.D. -5.2 -0.1 +0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 -0.1 N.D. -4.1 -0.3 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 -0.1 N.D. -4.2 -0.3 -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 N.D. -4.6 +0.0 -0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 +0.0 N.D. -4.0 -0.3 -0.3
stress R2A with Vancomycin 0.009 mM -1.2 N.D. -4.8 +1.2 +0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 N.D. -4.6 +0.1 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 N.D. -4.2 +0.0 +0.0
stress R2A with Vancomycin 0.009 mM -1.1 N.D. -4.0 +1.1 -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 N.D. -3.7 -0.2 +0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 -0.0 N.D. -3.3 -0.5 -0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 N.D. -3.2 -0.2 -0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 +0.0 N.D. -3.8 +0.2 -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 -0.1 N.D. -3.4 -0.2 +0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.1 N.D. -2.6 -1.1 +0.0
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 N.D. -2.8 -0.8 -0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.1 N.D. -2.4 -1.2 +0.1
stress Erythromycin 12.5 ug/mL +0.1 N.D. -3.0 +0.0 -0.4
in planta Bethi_Library_OD0.05 -0.1 N.D. -3.0 -0.1 +0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 N.D. -2.3 -0.9 +0.1
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.6 N.D. -1.6 +1.0 -0.6
stress R2A with Calcium Chloride Dihydrate 87.5 mM +0.1 N.D. -2.5 +0.5 +0.5
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 N.D. -2.4 +0.4 +0.8
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.6 N.D. -1.4 +1.6 -0.1
phage AgroPhage_D10 -0.2 N.D. +4.4 -0.0 -0.7
phage AgroPhage_E10 +0.3 N.D. +4.5 -0.4 -0.8
phage AgroPhage_D04 -0.2 N.D. +4.4 -0.4 +0.3
phage AgroPhage_F04 -0.1 N.D. +4.3 -0.0 -0.1
phage AgroPhage_E04 +0.0 N.D. +4.3 +0.3 -0.3
phage AgroPhage_F10 +0.0 N.D. +4.6 -0.0 +0.3
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