Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu8154 and Atu1314 are separated by 153 nucleotidesAtu1314 and Atu8155 are separated by 404 nucleotidesAtu8155 and Atu1316 overlap by 49 nucleotidesAtu1316 and Atu1317 are separated by 5 nucleotides Atu8154: Atu8154 - Plasmid stabilization system protein, at 1,305,008 to 1,305,382 Atu8154 Atu1314: Atu1314 - transcriptional regulator, TetR family, at 1,305,536 to 1,306,180 Atu1314 Atu8155: Atu8155 - hypothetical protein, at 1,306,585 to 1,306,902 Atu8155 Atu1316: Atu1316 - hypothetical protein, at 1,306,854 to 1,307,333 Atu1316 Atu1317: Atu1317 - metal dependent hydrolase, at 1,307,339 to 1,308,439 Atu1317
Group Condition Atu8154 Atu1314 Atu8155 Atu1316 Atu1317
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.6 -0.6 -0.2 N.D. -0.6
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 -0.6 -0.6 N.D. -0.0
phage AgroPhage_E10 -1.2 -0.1 -0.3 N.D. -0.1
phage AgroPhage_F10 -0.0 -0.3 -1.2 N.D. -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 +0.4 -1.8 N.D. -0.2
phage AgroPhage_F04 -0.2 +0.1 -1.2 N.D. -0.3
phage AgroPhage_A07 -0.6 -0.3 -0.1 N.D. -0.5
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.5 -1.0 +0.3 N.D. +0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.5 +1.1 -0.5 N.D. +0.0
phage AgroPhage_D04 +0.8 -0.0 -0.8 N.D. -0.5
phage AgroPhage_D10 +0.4 -0.5 -0.5 N.D. +0.2
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 -0.3 +0.6 N.D. -0.3
phage AgroPhage_E04 +0.1 +0.1 -0.9 N.D. +0.5
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 -0.3 +0.1 N.D. -0.5
carbon source m-Inositol (C) +0.3 -0.8 +0.4 N.D. +0.1
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.7 +0.1 -1.0 N.D. +0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 +0.1 -0.8 N.D. +0.4
phage AgroPhage_H04 -0.3 +0.7 -0.5 N.D. +0.3
carbon source D-Saccharic potassium salt (C) +0.7 +0.4 -0.4 N.D. -0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 +0.9 +0.4 N.D. -0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 -0.3 +0.7 N.D. +0.3
nitrogen source DL-2-Aminobutyric (N) -0.6 +1.9 -0.2 N.D. -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.2 -0.0 -0.3 N.D. -0.3
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.8 +0.6 +1.0 N.D. -0.0
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 +0.8 +0.1 N.D. +0.4
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 +1.4 -0.3 N.D. +0.5
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.4 -0.3 +0.6 N.D. +0.5
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 +0.2 +1.1 N.D. +0.1
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +1.0 +0.5 N.D. -0.0
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +0.1 +0.7 N.D. +0.5
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