Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1209 and Atu1210 are separated by 195 nucleotidesAtu1210 and Atu8149 are separated by 183 nucleotidesAtu8149 and Atu1212 are separated by 99 nucleotidesAtu1212 and Atu1213 are separated by 340 nucleotides Atu1209: Atu1209 - transcriptional regulator, LysR family, at 1,202,563 to 1,203,531 Atu1209 Atu1210: Atu1210 - putative 2,3-cyclic nucleotide 2-phosphodiesterase/3-nucleotidase, at 1,203,727 to 1,205,715 Atu1210 Atu8149: Atu8149 - hypothetical protein, at 1,205,899 to 1,206,234 Atu8149 Atu1212: Atu1212 - hypothetical protein, at 1,206,334 to 1,206,801 Atu1212 Atu1213: Atu1213 - hypothetical protein, at 1,207,142 to 1,207,849 Atu1213
Group Condition Atu1209 Atu1210 Atu8149 Atu1212 Atu1213
in planta Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days -0.3 -0.1 -0.2 -0.1 -2.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 +0.3 -0.3 +0.0 -3.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 +0.0 -0.4 -0.2 -2.7
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 -0.2 -0.2 +0.1 -2.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.0 -0.5 +0.5 -0.1 -2.4
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.1 +0.2 -0.5 -0.2 -1.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days +0.1 -0.2 -0.2 +0.1 -1.3
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 +0.2 +0.1 +0.3 -1.6
phage AgroPhage_E10 -0.1 -0.4 -1.5 -0.1 +0.6
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 +0.4 -0.1 -0.1 -1.1
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 +0.2 +0.0 +0.1 -1.4
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 -0.1 +0.4 +0.4 -1.5
stress syringaldehyde 1.25 mM -1.3 +0.1 -0.0 +0.1 +0.5
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.8 -0.0 -0.1 +0.1 -1.0
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 -0.1 -0.2 +0.2 +1.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 +0.1 -0.7 +0.5 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +0.2 +0.6 +0.2 -0.6
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.7 +0.2 +0.3 +0.4 -0.8
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 -0.0 -0.1 -0.2 +1.8
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.7 +0.5 +0.8 -0.9
nophagecontrol No phage control -0.2 +0.1 +0.5 +0.5 +0.6
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 -0.2 -0.0 +0.1 +2.0
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 +0.6 +0.0 +0.1 +1.7
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 +0.1 +0.4 +0.3 +1.2
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.2 +0.4 +0.3 +1.4
nitrogen source DL-2-Aminobutyric (N) +1.3 +0.7 +0.1 -0.1 +0.4
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 +0.1 -0.2 -0.1 +2.2
stress R2A with Vancomycin 0.009 mM +0.0 -0.1 -0.1 +0.3 +2.5
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 +0.1 +0.4 +0.4 +2.3
stress R2A with Vancomycin 0.009 mM -0.0 -0.2 +0.2 +0.1 +3.1
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