Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu8122 and Atu8123 are separated by 1049 nucleotidesAtu8123 and Atu8124 are separated by 164 nucleotidesAtu8124 and Atu0443 are separated by 498 nucleotidesAtu0443 and Atu0444 are separated by 7 nucleotides Atu8122: Atu8122 - hypothetical protein, at 435,142 to 436,047 Atu8122 Atu8123: Atu8123 - hypothetical protein, at 437,097 to 437,330 Atu8123 Atu8124: Atu8124 - hypothetical protein, at 437,495 to 437,917 Atu8124 Atu0443: Atu0443 - putative phage repressor, at 438,416 to 439,111 Atu0443 Atu0444: Atu0444 - hypothetical protein, at 439,119 to 439,418 Atu0444
Group Condition Atu8122 Atu8123 Atu8124 Atu0443 Atu0444
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.5 -0.9 -0.2 N.D. N.D.
phage AgroPhage_E10 -1.1 -0.1 -0.3 N.D. N.D.
stress R2A with Ceftriaxone hemi(heptahydrate) 0.0005 mM -0.5 -0.7 -0.3 N.D. N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 -0.7 -0.6 N.D. N.D.
Atjh2 -0.7 -0.3 -0.4 N.D. N.D.
lb_tobacco_leaf LB_Tobacco_Leaf -0.3 -0.9 -0.2 N.D. N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.6 -0.5 -0.3 N.D. N.D.
Atjh2 -0.3 -0.2 -0.9 N.D. N.D.
phage AgroPhage_B07 -0.3 -0.9 -0.1 N.D. N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days -0.3 -0.9 +0.0 N.D. N.D.
phage AgroPhage_F10 -0.6 -0.6 +0.0 N.D. N.D.
Atjh14 -0.3 +0.1 -0.8 N.D. N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 -0.5 -0.7 N.D. N.D.
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.9 +0.2 +0.1 N.D. N.D.
phage AgroPhage_F04 +0.6 -0.4 -0.3 N.D. N.D.
stress Chloramphenicol 12.5 ug/mL +0.2 -0.7 +0.3 N.D. N.D.
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -0.6 +0.3 N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.1 -0.6 +0.8 N.D. N.D.
Atjh10 -0.2 +0.8 -0.2 N.D. N.D.
stress Erythromycin 12.5 ug/mL -0.5 +0.6 +0.4 N.D. N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.7 -0.6 +0.5 N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.2 +0.9 +0.2 N.D. N.D.
stress Erythromycin 12.5 ug/mL -0.2 +0.7 +0.5 N.D. N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.9 +0.4 -0.1 N.D. N.D.
stress Pyrogallol 0.5 mM +0.5 +0.6 +0.5 N.D. N.D.
no phage P3L5 +0.7 +0.3 +0.6 N.D. N.D.
phage AgroPhage_A01 +0.8 +0.6 +0.8 N.D. N.D.
stress Acetovanillone 5 mM +1.0 +0.5 +0.9 N.D. N.D.
stress Acetovanillone 5 mM +1.0 +0.8 +0.8 N.D. N.D.
nitrogen source DL-2-Aminobutyric (N) +0.9 +0.8 +1.0 N.D. N.D.
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