Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu3570	Atu3571	Atu8113	Atu3572	Atu3573
in planta	Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.2	-0.4	-0.5	-0.9	-0.1
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.2	-0.3	+0.6	-1.0	-0.6
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.6	-0.4	+0.2	-0.3	-0.4
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075	-0.1	+0.1	-0.2	-0.9	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.2	-0.3	-0.1	-0.7	-0.5
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0	-0.1	+0.2	-0.3	-0.7	-0.4
stress	R2A with Polymyxin B sulfate 0.00075 mM	+0.1	+0.3	-0.2	-1.1	-0.1
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0	+0.2	+0.1	-0.3	-0.8	-0.2
lb_sorghum_leaf	LB_sorghum_leaf	+0.2	-0.5	-0.3	-0.5	+0.1
no phage	P1L4	-0.3	+0.3	+0.2	-0.9	-0.2
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.4	+0.1	-0.5	+0.3	-0.4
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.2	-0.3	+0.4	-1.1	-0.1
in planta	Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.4	-0.3	+0.2	-0.9	+0.6
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.2	+0.3	-0.0	-0.9	+0.2
carbon source	D-Saccharic potassium salt (C)	+0.3	-0.3	-0.1	-0.7	+0.2
carbon source	NAG (C)	+0.2	+0.2	+0.0	-1.0	+0.1
carbon source	L-ascorbate (C)	-0.2	+0.4	-0.0	-0.7	+0.2
in planta	Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.1	-0.2	+0.7	-0.6	-0.0
in planta	Plant=Sorghum_NK_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.4	+0.1	+0.3	-0.4	-0.4
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.2	-0.2	+0.3	-0.6	+0.5
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.5	-0.1	+0.4	-0.3	+0.6
in planta	Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days	+0.5	-0.2	+0.4	-0.5	+0.0
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.6	-0.0	-0.7	+0.7	-0.3
phage	AgroPhage_H03	+0.4	+0.4	+0.2	-0.5	-0.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.3	+0.6	-0.1	-0.5	+0.2
phage	AgroPhage_C10	+0.4	+0.3	-0.3	-0.2	+0.6
nitrogen source	DL-2-Aminobutyric (N)	-0.4	-0.1	+0.9	-0.1	+0.6
in planta	Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.1	+1.0	+0.0	-0.4	+0.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.0	+0.2	+0.2	-0.3	+0.9
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.6	+0.2	+0.3	-0.2	+0.4