Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 953 experiments or choose conditions or try the comparative fitness browser

500 ntAtu1669 and Atu1670 are separated by 150 nucleotidesAtu1670 and Atu8112 are separated by 165 nucleotidesAtu8112 and Atu8162 are separated by 106 nucleotidesAtu8162 and Atu1672 overlap by 4 nucleotides Atu1669: Atu1669 - glucose inhibited division protein, at 1,654,279 to 1,655,724 Atu1669 Atu1670: Atu1670 - alcohol dehydrogenase class III, at 1,655,875 to 1,657,002 Atu1670 Atu8112: Atu8112 - hypothetical protein, at 1,657,168 to 1,658,025 Atu8112 Atu8162: Atu8162 - hypothetical protein, at 1,658,132 to 1,658,395 Atu8162 Atu1672: Atu1672 - long-chain fatty acid-CoA ligase, at 1,658,392 to 1,659,924 Atu1672
Group Condition Atu1669 Atu1670 Atu8112 Atu8162 Atu1672
nophagecontrol No phage control -0.3 +0.2 -0.6 -3.6 +0.0
phage AgroPhage_C04 -0.0 -0.2 -0.5 -2.9 +0.1
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 -0.2 -0.2 -2.8 -0.0
phage phage 100.2 -0.2 -0.1 -0.0 -1.8 -0.2
phage AgroPhage_E10 +0.4 -0.4 -0.4 -1.9 +0.1
phage AgroPhage_D10 +0.1 +0.2 -0.6 -1.8 -0.1
phage AgroPhage_F04 +0.0 -0.0 -0.2 -1.9 +0.0
phage phage 99.1 -0.1 +0.1 -0.2 -1.9 +0.0
stress R2A with Oxytetracycline 0.0002 mM +0.0 -0.2 +0.0 -1.9 +0.1
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 +0.1 -0.2 -1.7 -0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 +0.2 +0.0 -1.5 -0.3
carbon source DL-glyceraldehyde (C) +0.3 -0.7 -0.1 -1.0 -0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days +0.1 +0.1 -0.3 -1.5 +0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +0.1 +0.2 -2.1 +0.2
phage AgroPhage_F10 +0.2 -0.0 -0.6 -0.9 +0.2
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 +0.0 +0.4 -1.3 -0.2
carbon source L-ascorbate (C) +0.6 -1.1 -0.2 -0.0 -0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 +0.2 -0.7 +1.2 +0.2
nophagecontrol No phage control +0.2 -0.1 -0.5 +1.3 +0.2
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 -0.1 +0.2 +1.4 -0.1
phage AgroPhage_E04 +0.3 -0.1 -0.4 +1.4 +0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.3 +0.1 -0.0 +1.6 +0.2
in planta Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days +0.1 +0.2 -0.4 +1.9 -0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.4 -0.3 +1.7 -0.1
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.2 -0.2 +1.3 +0.4
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 +0.7 +0.3 +0.8 +0.5
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 +0.4 +0.4 +1.1 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +0.2 +0.1 +1.3 +0.5
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.4 -0.1 +2.2 +0.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 -0.0 -0.2 +5.6 -0.2
remove
Atu1669
plot		 remove
Atu1670
plot		 remove
Atu8112		 remove
Atu8162
plot		 remove
Atu1672
plot