Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu6014	Atu8062	Atu8054	Atu6015	Atu6016
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.3	+0.1	-4.2	-0.3	-0.1
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.0	-0.3	-4.3	+0.1	-0.3
in planta	Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.0	-0.1	-4.3	-0.1	-0.2
in planta	Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.1	-0.1	-4.4	-0.2	+0.0
in planta	Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.1	-0.0	-4.3	+0.1	-0.1
phage	AgroPhage_F04	-0.1	+0.1	-4.4	+0.1	-0.0
phage	AgroPhage_D04	-0.3	+0.2	-4.3	-0.0	+0.0
in planta	Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.0	-0.0	-4.2	+0.0	+0.3
stress	R2A with Kanamycin sulfate 0.02 mM	-0.3	-0.2	-3.1	-0.1	-0.0
in planta	Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.4	+0.0	-3.2	-0.0	-0.0
phage	AgroPhage_A05	+0.0	-0.0	-3.6	+0.1	+0.0
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.0	+0.2	-2.5	-0.1	-1.2
nitrogen source	L-pyroglutamic (N)	-0.1	-0.2	-2.6	-0.1	+0.0
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.0	-0.1	-1.9	-0.2	-0.6
stress	R2A with vanadium chloride 0.08 mM	-0.0	+0.1	-2.7	+0.0	-0.0
carbon source	Methyl alpha-D-glucopyranoside (C)	-0.1	-0.1	-2.4	-0.0	+0.0
no phage	P3L5	-0.1	-0.1	-2.1	+0.1	-0.5
stress	R2A with Vancomycin 0.009 mM	-0.1	+0.2	-2.9	+0.0	+0.1
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.1	-0.2	-2.4	-0.1	+0.0
in planta	Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.2	-0.2	-2.5	+0.1	-0.2
lb_benthi_root	LB_Benthi_root	+0.1	+0.0	-2.6	-0.0	+0.0
phage	phage 99.2	+0.1	-0.4	-2.2	+0.2	-0.0
stress	R2A with Tetracycline 0.002 mM	+0.1	+0.1	-2.3	-0.2	+0.1
carbon source	Gentibiose (C)	+0.0	+0.2	-2.5	+0.0	+0.1
carbon source	D-(-)-lyxose (C)	+0.1	+0.3	-2.8	+0.2	+0.2
nitrogen source	DL-2-Aminobutyric (N)	+0.1	+0.1	-2.6	+0.4	-0.1
carbon source	Ribitol (C)	+0.1	+0.3	-2.3	+0.0	-0.0
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	-0.1	+0.0	+2.5	+0.0	+0.3
carbon source	2-Keto-D-gluconic hemicalcium salt (C)	-0.0	+0.2	+2.1	+0.2	+0.3
carbon source	D-Sorbitol (C)	+0.5	+0.3	+2.7	+0.0	-0.1