Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu5006 and Atu5007 are separated by 225 nucleotidesAtu5007 and Atu8044 are separated by 261 nucleotidesAtu8044 and Atu5008 are separated by 55 nucleotidesAtu5008 and Atu5010 are separated by 1064 nucleotides Atu5006: Atu5006 - deoxyfructosyl-amino acid transporter periplasmic binding protein, at 7,921 to 8,754 Atu5006 Atu5007: Atu5007 - santhopine-responsive transcriptional repressor, at 8,980 to 10,044 Atu5007 Atu8044: Atu8044 - hypothetical protein, at 10,306 to 10,611 Atu8044 Atu5008: Atu5008 - hypothetical protein, at 10,667 to 11,452 Atu5008 Atu5010: Atu5010 - hypothetical protein, at 12,517 to 12,717 Atu5010
Group Condition Atu5006 Atu5007 Atu8044 Atu5008 Atu5010
nitrogen source L-Ornithine (N) +0.3 -2.0 N.D. -0.1 -0.8
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.3 -1.5 N.D. -0.0 -0.6
nitrogen source L-Ornithine (N) +0.0 -1.2 N.D. +0.2 -1.3
carbon source D-Saccharic potassium salt (C) +0.0 -1.5 N.D. -0.2 -0.6
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 -2.3 N.D. -0.2 +0.1
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 -2.1 N.D. -0.1 -0.2
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 -0.8 N.D. -0.7 -0.4
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 -0.0 N.D. -0.5 -1.3
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -0.9 N.D. -0.5 -0.5
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 -1.8 N.D. -0.5 +0.2
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.0 -1.6 N.D. -0.0 -0.3
nitrogen source 5-Aminovaleric (N) +0.2 -1.0 N.D. +0.0 -1.0
Atjh14 -0.0 -0.2 N.D. +0.2 -1.7
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 -1.1 N.D. -0.1 -0.5
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 -1.3 N.D. -0.1 -0.4
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -1.0 N.D. +0.2 -1.0
nitrogen source D-Lysine (N) +0.3 -1.5 N.D. -0.0 -0.2
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 -0.9 N.D. -0.5 -0.2
nitrogen source Choline chloride (N) +0.3 -0.3 N.D. -0.2 -1.1
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 -1.5 N.D. -0.1 +0.2
phage AgroPhage_E10 +0.3 -0.1 N.D. +0.4 -1.4
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 +0.7 N.D. -0.1 -1.2
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 -1.3 N.D. -0.3 +0.8
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +0.1 N.D. +0.6 -1.4
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 +0.8 N.D. -0.0 -1.0
nitrogen source DL-2-Aminobutyric (N) -0.1 -1.0 N.D. -0.0 +1.1
phage AgroPhage_C04 +0.6 -0.1 N.D. +0.5 -0.8
nitrogen source L-Methionine (N) +0.2 +1.1 N.D. -0.1 -0.4
stress R2A with Chlorate 400 mM -0.2 +1.4 N.D. -0.1 +0.3
stress Chloramphenicol 12.5 ug/mL +0.1 +0.3 N.D. +0.5 +1.2
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